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Q0AVW6 (Q0AVW6_SYNWW) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Swol_1840 EMBL ABI69138.1
OrganismSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) [Complete proteome] [HAMAP] EMBL ABI69138.1
Taxonomic identifier335541 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas

Protein attributes

Sequence length415 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q0AVW6 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 5048C9EE9E97E311

FASTA41545,456
        10         20         30         40         50         60 
MALAMKPAST LLMDSHMANM MMTFVEGHER ILKKARSKKE AFRTSAPFLT PTYGKDGVIY 

        70         80         90        100        110        120 
FTTNTERYDF VENHNMDIAG IRVGEPLVKN GVVQRCIQTR QAISETVNEK IYGISLNLWA 

       130        140        150        160        170        180 
APIFEDDDEH NAVVGTYGVF APRLHPVVKA FDIFAPIIID SQPEGAWVGA SDTEKVLCRM 

       190        200        210        220        230        240 
GSEKFDTNVV VGLPISEVKT AMQTMQAQKR VQVDINTRKL GNIRMISIPL FDEESGELVG 

       250        260        270        280        290        300 
TFGITTPRNL ASNLQNAADK LRSHTDDMAR VMQQIASSAG EINITESKLA DIIKSIQENL 

       310        320        330        340        350        360 
ENIVRVLSFT KDVANQTKML GMNAAIEAAR AGDLGKGFGV VAGEIRKLSD QSKQTADEIG 

       370        380        390        400        410 
QLTRAIEIRI KDAVEASQGT VMQSQEQAAA TQEVTATVME MSEVAEKLAI LAKSL 

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References

[1]"The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 2245B / Goettingen.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000448 Genomic DNA. Translation: ABI69138.1.
RefSeqYP_754509.1. NC_008346.1.

3D structure databases

ProteinModelPortalQ0AVW6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING335541.Swol_1840.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI69138; ABI69138; Swol_1840.
GeneID4282938.
KEGGswo:Swol_1840.
PATRIC23858695. VBISynWol51738_1986.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000277546.
OMAAFDIFAP.
OrthoDBEOG6JHRG7.

Enzyme and pathway databases

BioCycSWOL335541:GHL1-1893-MONOMER.

Family and domain databases

InterProIPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0AVW6_SYNWW
AccessionPrimary (citable) accession number: Q0AVW6
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)