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Q0AVA0 (Q0AVA0_SYNWW) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length678 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ABI69354.1
Chain26 – 678653 Potential EMBL ABI69354.1
PRO_5000131427

Sequences

Sequence LengthMass (Da)Tools
Q0AVA0 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 88A4AED70CE38489

FASTA67874,681
        10         20         30         40         50         60 
MSIGKKILFS LLGLSLLVTL LLCAISIYGF NDIKATFQQE NKSAIDDLYE KNVAEITKSS 

        70         80         90        100        110        120 
SKLAISLANY YAQTINIDFE RIMGELNTMK GDIETLYNSG GTTHAIPISR YEEYIISQAA 

       130        140        150        160        170        180 
HPSRQEVNRT LNVLSAATPM FDNILKIEPK ISLAYLVLEN GMVISSTKTF YPAVEKADMR 

       190        200        210        220        230        240 
TRDWYKDAVK AGTVNWSDLY TGTDNRSYVT CATPIHDKKG QLVGVLAFDL RVSEISEKTL 

       250        260        270        280        290        300 
NTSDNTYIAA FIMNRQGHVL LSSLDVKATE KQPYFEKFIK NIDLKTTISD YYSDDSSIIG 

       310        320        330        340        350        360 
YAPIKSTDWL LVTVLDYEMM MAPVQAVAES VSATGAKMEQ VISDETRRVF FIFLIIILVS 

       370        380        390        400        410        420 
LPLVFMTATR LSRSITRPVE ILADGARVIG EGNLDYEFAD LGTDEMGMLA TTFNGMIVRL 

       430        440        450        460        470        480 
KEYMEAVARS AADKQRLESE LEVARDIQLG MLPQQIDCPG YDITGMMVPA KEVGGDFYDF 

       490        500        510        520        530        540 
FMLNDQKLCS VVADVSGKGV GAALFMTVAK MVLKTAAQAH NITVDKLLST ANNLLCQENP 

       550        560        570        580        590        600 
AELFVTAYVG IMDINSGEIA YACAGHNPPV IVHPDGSSEF VPVKPKLPLA AMEGIQYPIM 

       610        620        630        640        650        660 
YTQLQTGETL VLYTDGVTEA TNLDEELYGD ARLLAALPSV KRLSAPEIIE GIKSNVDIFV 

       670 
GEAPQFDDIT IVAIRKIS 

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References

[1]"The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 2245B / Goettingen.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000448 Genomic DNA. Translation: ABI69354.1.
RefSeqYP_754725.1. NC_008346.1.

3D structure databases

ProteinModelPortalQ0AVA0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING335541.Swol_2060.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI69354; ABI69354; Swol_2060.
GeneID4283248.
KEGGswo:Swol_2060.
PATRIC23859200. VBISynWol51738_2235.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2208.
KOK07315.
OMATHAIPIS.
OrthoDBEOG66QKXZ.

Enzyme and pathway databases

BioCycSWOL335541:GHL1-2116-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR001932. PP2C-like_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0AVA0_SYNWW
AccessionPrimary (citable) accession number: Q0AVA0
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: June 11, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)