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Q0AV12 (Q0AV12_SYNWW) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Swol_2151 EMBL ABI69442.1
OrganismSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) [Complete proteome] [HAMAP] EMBL ABI69442.1
Taxonomic identifier335541 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas

Protein attributes

Sequence length656 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI69442.1
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential EMBL ABI69442.1
Chain32 – 656625 Potential EMBL ABI69442.1
PRO_5000131437

Sequences

Sequence LengthMass (Da)Tools
Q0AV12 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 3AD25A2BAE795282

FASTA65671,115
        10         20         30         40         50         60 
MKFTQSLKFN FLLWILGAFF LASIGQSLVS YWSGKDILIQ QIQENCTQIA DATGDEIDAW 

        70         80         90        100        110        120 
IAGKFSEMST LAKLDEVRNL DAERLPALLS GLMSADHDNL YVVWPDGTVV GDTGLQDFKL 

       130        140        150        160        170        180 
DERNYFKLAM AGKANIDTPV ISKATGNLVA PIAVPIYQGD KVVGVLGATI KAEKITEITS 

       190        200        210        220        230        240 
DVKVGETGYA YLINQDTTFV AHPKKDYILQ KKLSDDAEGM EDVIKRMTAL ETGIAEYEYD 

       250        260        270        280        290        300 
GEVKYMAYDP VHLAGWSLAV TVPVSEVTQP LDAMLHKMIM VTIVTLLLLS IIIWFVTGRL 

       310        320        330        340        350        360 
TKPILGMVDI TTRLSQRDLT QEIESRNRSE IGLLMNSLRD MNENLNTVLK QMAGSSERLA 

       370        380        390        400        410        420 
SVSEDLMQTA RQTGQASEQV SASAEEVARA ATAEAEDAQK TSELVQQVGM AMQNVGSTTE 

       430        440        450        460        470        480 
AISSQSLNFK SIVGRVTGLM LRQKDEMALT VNSTVNVAGV IEELSNKTQE IGEIINVINN 

       490        500        510        520        530        540 
IAGQTNLLAL NAAIEAARAG EAGRGFAVVA EEVRKLAEET GSATLNIATI INEVQAGVER 

       550        560        570        580        590        600 
AVTEVDKVEK QVREQGVSLG ESVDSFREIE QGAVEIDNAI QDISATFEEL LASADEMTQA 

       610        620        630        640        650 
IENISAATEE SAASAEEVTA ISQNQLAAVQ NIVAVSQELD KLAVELKKVT DTFKLK 

« Hide

References

[1]"The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 2245B / Goettingen.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000448 Genomic DNA. Translation: ABI69442.1.
RefSeqYP_754813.1. NC_008346.1.

3D structure databases

ProteinModelPortalQ0AV12.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING335541.Swol_2151.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI69442; ABI69442; Swol_2151.
GeneID4283167.
KEGGswo:Swol_2151.
PATRIC23859402. VBISynWol51738_2335.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000118692.
KOK03406.
OMAEPAFITW.
OrthoDBEOG676Z1J.
ProtClustDBCLSK777519.

Enzyme and pathway databases

BioCycSWOL335541:GHL1-2208-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0AV12_SYNWW
AccessionPrimary (citable) accession number: Q0AV12
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: February 19, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)