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Protein
Submitted name:

Putative methyl-accepting chemotaxis sensory transducer

Gene

Swol_2152

Organism
Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. signal transducer activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSWOL335541:GHL1-2209-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Swol_2152Imported
OrganismiSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)Imported
Taxonomic identifieri335541 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas
ProteomesiUP000001968: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626 PotentialImportedAdd
BLAST
Chaini27 – 655629 PotentialImportedPRO_5000131438Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi335541.Swol_2152.

Structurei

3D structure databases

ProteinModelPortaliQ0AV11.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000118692.
KOiK03406.
OMAiIRMIRIA.
OrthoDBiEOG6MM1H2.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0AV11-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MRFYHSLRFR LLIGILLLCF LASIGQSLVS FWSGKNVLTS EITGKCQQIA
60 70 80 90 100
ESTCQVIDTY FAGKLEKLDT LSKISLVKNM QEEEIIPTLA GIMTAEYDNI
110 120 130 140 150
YVIWPDGSTV TDKGERPQLA DRDYFKLAIK GQANIGTPIF SKTTGNMVAP
160 170 180 190 200
IAMPIFQGQQ IVGVLGATLK IQELIDVVNQ VKIGDTGYAY LIDREGIFVA
210 220 230 240 250
HPQSEFILES NQFELGEELA AIGQKMIAGE SGIVNYKYEG MEKYMAYAPV
260 270 280 290 300
KSTGWALGVT VPVKEVNQPL NDMMQKIILI TVATLALAFL IIWFLSGSFT
310 320 330 340 350
HPVLAMVGIT ERLSQRDLTQ EIKSNDSTEI GLLMNSLGEM NDNLHQVLGQ
360 370 380 390 400
MAASAERLAG LADGLFSGAE QSGKASEQVH ASAEEVARAA ATQAEDAQKT
410 420 430 440 450
SVLSRQVGMA MQNVSQATED MSQQSIHFKD IVAQATGLML QQKEKMDQTV
460 470 480 490 500
ESTVNVSEVI MDLDNKTQEI GEIISVITNI AGQTNLLALN AAIEAARAGE
510 520 530 540 550
SGRGFAVVAE EVRKLAEETG SATLNIGNII SEVQAGVERV VAEVQKVEKQ
560 570 580 590 600
VREQGSSLGE SVGAFREIEN GAGKMDNSIQ DISATFEEIV ASADEIIQAI
610 620 630 640 650
ENISAVTQES AASAEEVTAI SQNQLAAAQN IVQVSQELET LAAELKKVTG

TFILR
Length:655
Mass (Da):70,774
Last modified:October 17, 2006 - v1
Checksum:iE70234CCCEF933DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA. Translation: ABI69443.1.
RefSeqiWP_011641534.1. NC_008346.1.
YP_754814.1. NC_008346.1.

Genome annotation databases

EnsemblBacteriaiABI69443; ABI69443; Swol_2152.
GeneIDi4283168.
KEGGiswo:Swol_2152.
PATRICi23859404. VBISynWol51738_2336.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000448 Genomic DNA. Translation: ABI69443.1.
RefSeqiWP_011641534.1. NC_008346.1.
YP_754814.1. NC_008346.1.

3D structure databases

ProteinModelPortaliQ0AV11.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi335541.Swol_2152.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI69443; ABI69443; Swol_2152.
GeneIDi4283168.
KEGGiswo:Swol_2152.
PATRICi23859404. VBISynWol51738_2336.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000118692.
KOiK03406.
OMAiIRMIRIA.
OrthoDBiEOG6MM1H2.

Enzyme and pathway databases

BioCyciSWOL335541:GHL1-2209-MONOMER.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
    Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
    Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 2245B / GoettingenImported.

Entry informationi

Entry nameiQ0AV11_SYNWW
AccessioniPrimary (citable) accession number: Q0AV11
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: January 7, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.