Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q0AV11 (Q0AV11_SYNWW) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Swol_2152 EMBL ABI69443.1
OrganismSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) [Complete proteome] [HAMAP] EMBL ABI69443.1
Taxonomic identifier335541 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas

Protein attributes

Sequence length655 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI69443.1
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential EMBL ABI69443.1
Chain27 – 655629 Potential EMBL ABI69443.1
PRO_5000131438

Sequences

Sequence LengthMass (Da)Tools
Q0AV11 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: E70234CCCEF933DD

FASTA65570,774
        10         20         30         40         50         60 
MRFYHSLRFR LLIGILLLCF LASIGQSLVS FWSGKNVLTS EITGKCQQIA ESTCQVIDTY 

        70         80         90        100        110        120 
FAGKLEKLDT LSKISLVKNM QEEEIIPTLA GIMTAEYDNI YVIWPDGSTV TDKGERPQLA 

       130        140        150        160        170        180 
DRDYFKLAIK GQANIGTPIF SKTTGNMVAP IAMPIFQGQQ IVGVLGATLK IQELIDVVNQ 

       190        200        210        220        230        240 
VKIGDTGYAY LIDREGIFVA HPQSEFILES NQFELGEELA AIGQKMIAGE SGIVNYKYEG 

       250        260        270        280        290        300 
MEKYMAYAPV KSTGWALGVT VPVKEVNQPL NDMMQKIILI TVATLALAFL IIWFLSGSFT 

       310        320        330        340        350        360 
HPVLAMVGIT ERLSQRDLTQ EIKSNDSTEI GLLMNSLGEM NDNLHQVLGQ MAASAERLAG 

       370        380        390        400        410        420 
LADGLFSGAE QSGKASEQVH ASAEEVARAA ATQAEDAQKT SVLSRQVGMA MQNVSQATED 

       430        440        450        460        470        480 
MSQQSIHFKD IVAQATGLML QQKEKMDQTV ESTVNVSEVI MDLDNKTQEI GEIISVITNI 

       490        500        510        520        530        540 
AGQTNLLALN AAIEAARAGE SGRGFAVVAE EVRKLAEETG SATLNIGNII SEVQAGVERV 

       550        560        570        580        590        600 
VAEVQKVEKQ VREQGSSLGE SVGAFREIEN GAGKMDNSIQ DISATFEEIV ASADEIIQAI 

       610        620        630        640        650 
ENISAVTQES AASAEEVTAI SQNQLAAAQN IVQVSQELET LAAELKKVTG TFILR 

« Hide

References

[1]"The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 2245B / Goettingen.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000448 Genomic DNA. Translation: ABI69443.1.
RefSeqYP_754814.1. NC_008346.1.

3D structure databases

ProteinModelPortalQ0AV11.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING335541.Swol_2152.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI69443; ABI69443; Swol_2152.
GeneID4283168.
KEGGswo:Swol_2152.
PATRIC23859404. VBISynWol51738_2336.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000118692.
KOK03406.
OMASASMNEI.
OrthoDBEOG6MM1H2.

Enzyme and pathway databases

BioCycSWOL335541:GHL1-2209-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0AV11_SYNWW
AccessionPrimary (citable) accession number: Q0AV11
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: June 11, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)