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Q0AV01 (Q0AV01_SYNWW) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Swol_2162 EMBL ABI69453.1
OrganismSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) [Complete proteome] [HAMAP] EMBL ABI69453.1
Taxonomic identifier335541 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesSyntrophomonadaceaeSyntrophomonas

Protein attributes

Sequence length665 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI69453.1
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3838 Potential EMBL ABI69453.1
Chain39 – 665627 Potential EMBL ABI69453.1
PRO_5000131442

Sequences

Sequence LengthMass (Da)Tools
Q0AV01 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 6DD66F3EF40FE83D

FASTA66570,858
        10         20         30         40         50         60 
MKSIGSRLTL YISMVVLFFC AGLGFISYFY ASKALMANIE QSVVAKAQDA TKLVGSELDN 

        70         80         90        100        110        120 
HLSVMETIAE QPEITSMKWE EQRPILEQAN KRLGYLMMGV AGLDGQVLTT AGSTTNLKDR 

       130        140        150        160        170        180 
DYFDQALKGQ SSVSDPIVSR IDGNTIVMMV SPIRGTEGEV IGVLAAALDG LILSQIIAGV 

       190        200        210        220        230        240 
NFSDSGYAYM LNRQGQVIAH PKEEMVIEQY DPIAEADKDP KLAPLAAIVK NMLKAECGYG 

       250        260        270        280        290        300 
EYLWTDGTNK FMGYAPVENT GWSIAVTAPQ DEVLAGLKSM TVGVLVAALV FLLIGIALAT 

       310        320        330        340        350        360 
YLGRTLAQPI KNVAGNASLI ADGDLRVEIA AGALARQDEI GHLASSLDNM VQGLRNMLHE 

       370        380        390        400        410        420 
VALNSQEVAA SSQELAASGE NIASIVEELS ASTEEIAAGI TNISSATDEV NASGEGISSA 

       430        440        450        460        470        480 
LLLASKDAEQ GVLQAQSIEK RAARMQNGAQ DHKKTAENVY GTIKEKLTAA IEEARVVEQI 

       490        500        510        520        530        540 
SELAENISGI ASQTNLLALN AAIEAARAGE QGKGFAVVAE EVRKLAENSA SAVEGIQGMT 

       550        560        570        580        590        600 
EQVQRSIANL TNYAEELLNF INTQIIADYG DMVTICKHYK NDSDMFLNLI EKIKKHTEEV 

       610        620        630        640        650        660 
LASVEDINHS LDSTAGTIRD SSAGAQKIAE ASQTAAIAAT EISAASVRMA ENAEKLNLLI 


TRFKL 

« Hide

References

[1]"The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production."
Sieber J.R., Sims D.R., Han C., Kim E., Lykidis A., Lapidus A.L., McDonnald E., Rohlin L., Culley D.E., Gunsalus R., McInerney M.J.
Environ. Microbiol. 12:2289-2301(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 2245B / Goettingen.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000448 Genomic DNA. Translation: ABI69453.1.
RefSeqYP_754824.1. NC_008346.1.

3D structure databases

ProteinModelPortalQ0AV01.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING335541.Swol_2162.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI69453; ABI69453; Swol_2162.
GeneID4283143.
KEGGswo:Swol_2162.
PATRIC23859426. VBISynWol51738_2347.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
KOK03406.
OMAEERINTR.
OrthoDBEOG6Q2SFW.

Enzyme and pathway databases

BioCycSWOL335541:GHL1-2219-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0AV01_SYNWW
AccessionPrimary (citable) accession number: Q0AV01
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: June 11, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)