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Protein

Putative thymidine phosphorylase

Gene

Mmar10_0191

Organism
Maricaulis maris (strain MCS10)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciMMAR394221:GHNB-197-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative thymidine phosphorylaseUniRule annotation (EC:2.4.2.4UniRule annotation)
Alternative name(s):
TdRPaseUniRule annotation
Gene namesi
Ordered Locus Names:Mmar10_0191
OrganismiMaricaulis maris (strain MCS10)
Taxonomic identifieri394221 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesHyphomonadaceaeMaricaulis
ProteomesiUP000001964 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 519519Putative thymidine phosphorylasePRO_0000314701Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi394221.Mmar10_0191.

Structurei

3D structure databases

ProteinModelPortaliQ0ATA0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0213.
HOGENOMiHOG000252767.
KOiK00758.
OMAiCEAQGGF.
OrthoDBiEOG61ZTGG.

Family and domain databases

Gene3Di3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
HAMAPiMF_00703. Thymid_phosp_2.
InterProiIPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR017872. Pyrmidine_PPase_CS.
IPR028579. Thym_Pase_Put.
IPR013466. Thymidine/AMP_Pase.
IPR000053. Thymidine/pyrmidine_PPase.
[Graphical view]
PANTHERiPTHR10515. PTHR10515. 1 hit.
PfamiPF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view]
SMARTiSM00941. PYNP_C. 1 hit.
[Graphical view]
SUPFAMiSSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsiTIGR02645. ARCH_P_rylase. 1 hit.
PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0ATA0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKMIDISAM PAELSEKNTL TARRLGIDTH EHAVIYMRAD CHICRAEGFN
60 70 80 90 100
NHARIKVSGP SNKAIIATLN LVVTDLLSPG QIGLSETAWL RLQLNEGDPV
110 120 130 140 150
RLIHPAPLLS LSAVRAKIFG EPLDQNNLDA IVGDIAAGRF SDIHLSAFLT
160 170 180 190 200
ASAAHEQSFE EIRDLTLSMV NVGQRLDWGR APIVDKHCVG GLPGNRTTPI
210 220 230 240 250
VVAICVAAGL TMPKTSSRAI TSPAGTADTM ETLAPVELDV SAMRRVVETV
260 270 280 290 300
GGCIVWGGAV ALSPVDDTLI RIERALDIDS DGQLVASVLS KKIAAGATHL
310 320 330 340 350
VIDMPVGPTA KVRTEEAAAR LEGLFARVGS NLGLNLKIMR TDGSQPVGRG
360 370 380 390 400
IGPALEAWDV LAVLNNEGHN VPDLTVQATL LAGELLEMGQ AAPAGRGAEL
410 420 430 440 450
ATELLVNGRA WRAFEAICEA QGGFREPPTA PHYQVIQSPR DGVVGRIDNR
460 470 480 490 500
RLAKAAKLAG APASKAAGIV LHAKLGSQMV KGQPLYSLHS QSLGELSYAH
510
DYLASQPEII EIEEEQCPR
Length:519
Mass (Da):55,091
Last modified:October 17, 2006 - v1
Checksum:iEFA638F8D029E71B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000449 Genomic DNA. Translation: ABI64487.1.

Genome annotation databases

EnsemblBacteriaiABI64487; ABI64487; Mmar10_0191.
KEGGimmr:Mmar10_0191.
PATRICi22448360. VBIMarMar77530_0190.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000449 Genomic DNA. Translation: ABI64487.1.

3D structure databases

ProteinModelPortaliQ0ATA0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi394221.Mmar10_0191.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI64487; ABI64487; Mmar10_0191.
KEGGimmr:Mmar10_0191.
PATRICi22448360. VBIMarMar77530_0190.

Phylogenomic databases

eggNOGiCOG0213.
HOGENOMiHOG000252767.
KOiK00758.
OMAiCEAQGGF.
OrthoDBiEOG61ZTGG.

Enzyme and pathway databases

BioCyciMMAR394221:GHNB-197-MONOMER.

Family and domain databases

Gene3Di3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
HAMAPiMF_00703. Thymid_phosp_2.
InterProiIPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR017872. Pyrmidine_PPase_CS.
IPR028579. Thym_Pase_Put.
IPR013466. Thymidine/AMP_Pase.
IPR000053. Thymidine/pyrmidine_PPase.
[Graphical view]
PANTHERiPTHR10515. PTHR10515. 1 hit.
PfamiPF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view]
SMARTiSM00941. PYNP_C. 1 hit.
[Graphical view]
SUPFAMiSSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsiTIGR02645. ARCH_P_rylase. 1 hit.
PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MCS10.

Entry informationi

Entry nameiTYPH_MARMM
AccessioniPrimary (citable) accession number: Q0ATA0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 17, 2006
Last modified: July 22, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.