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Q0AT38 (Q0AT38_MARMM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Heparinase II/III family protein EMBL ABI64549.1
Gene names
Ordered Locus Names:Mmar10_0256
OrganismMaricaulis maris (strain MCS10) [Complete proteome] [HAMAP]
Taxonomic identifier394221 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Hyphomonadaceae › Maricaulis

Protein attributes

Sequence length722 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABI64549.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processalginic acid catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentperiplasmic space

Inferred from electronic annotation. Source: InterPro

   Molecular functionpoly(beta-D-mannuronate) lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential EMBL ABI64549.1
Chain23 – 722700 Potential EMBL ABI64549.1
PRO_5000131554

Sequences

Sequence LengthMass (Da)Tools
Q0AT38 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: B65CFBF3925FB6F8

FASTA72279,077
        10         20         30         40         50         60 
MIRIVGLVAA ALLATTSCAS AQPNLILTGE GVEAFREAGA LPPLMQRALD AATRRVEASI 

        70         80         90        100        110        120 
QAGPIVPEPV DPGGGYSHER HKENYKIIHD AGLLFQLTGE RRYLEHAETY LLAYADMYGD 

       130        140        150        160        170        180 
LPLHPERRNQ APGRLFWQSL NEAVWLVYSI QGYDAIRAEL SDASRDRIEA ALFRPMAEFL 

       190        200        210        220        230        240 
STESPQTFQR IHNHGTWAAA AVGMTGYALD DPALVERALF GLELDGEAGF LAQLDQLFSP 

       250        260        270        280        290        300 
DGYYTEGPYY QRYALMPFVL FGQAVQNNEP ERGIFEHRDG ILLEAILSTI HQSYAGRFFP 

       310        320        330        340        350        360 
INDAIREKGL DTVEVVYGVA AAYSLTGDTG LLSIADQQGA TVLTGDGLAV ATDLDAGMAS 

       370        380        390        400        410        420 
PFAFDTRLLR DGPDGNQGGL AILRMGAGEL AQTLVAKHTG QGMGHGHFDK LSLILYDGGQ 

       430        440        450        460        470        480 
EILTDYGAAR FLNVPSKDGG RYLPENSSWA RQTIAHNTVV LNETSHHGGD WRRAQESWPS 

       490        500        510        520        530        540 
IALFEQRDGV NVVSASISDA YPDATLTRTT FQLQSENTAS PLILDVFDVV ADEPSQIDLP 

       550        560        570        580        590        600 
TYFAGQLTDF DIAFERFGSQ QTALGAGNGY QHLWVEAQSE IAADRARFTW LTENRFYTYH 

       610        620        630        640        650        660 
ALVSEPFEAR IVRTGANDPD FNLRTQQGIL LRVPSAESAR FISVFEPHGR YDPAQEITVA 

       670        680        690        700        710        720 
SESGIDEIRS VEGETATLIQ IVFNSGQRLS VGLAHDLHAG AHTINADGHR YEWTGAYNIF 


GE

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References

[1]"Complete sequence of Maricaulis maris MCS10."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Viollier P., Stephens C., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MCS10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000449 Genomic DNA. Translation: ABI64549.1.
RefSeqYP_755487.1. NC_008347.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ0AT38.

Protein family/group databases

CAZyPL17. Polysaccharide Lyase Family 17.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4284120.
GenomeReviewsGene locus Mmar10_0256 in contig CP000449_GR.
KEGGmmr:Mmar10_0256.
NMPDRfig|394221.5.peg.238.
PATRIC22448488. VBIMarMar77530_0254.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG45022.
HOGENOMHBG742331.
OMANGYQHLW.
ProtClustDBCLSK769500.

Family and domain databases

InterProIPR008397. Alginate_lyase_dom.
IPR008929. Chondroitin_lyas.
IPR012480. Hepar_II_III.
[Graphical view]
Gene3DG3DSA:1.50.10.110. Alginate_lyase. 1 hit.
PfamPF05426. Alginate_lyase. 1 hit.
PF07940. Hepar_II_III. 1 hit.
[Graphical view]
SUPFAMSSF48230. Chondroitin_lyas. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0AT38_MARMM
AccessionPrimary (citable) accession number: Q0AT38
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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