Q0AQD2 (RS6_MARMM) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S6

Gene names

Name:	rpsF
Ordered Locus Names:	Mmar10_1212

Organism

Maricaulis maris (strain MCS10) [Complete proteome] [HAMAP]

Taxonomic identifier

394221 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Hyphomonadaceae › Maricaulis

Protein attributes

Sequence length	117 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds together with S18 to 16S ribosomal RNA By similarity. HAMAP MF_00360
Sequence similarities	Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 117	117	30S ribosomal protein S6 HAMAP MF_00360		PRO_1000005293

Sequences

	Sequence		Length	Mass (Da)
	Q0AQD2 [UniParc]. Last modified October 17, 2006. Version 1. Checksum: 537BB2E1EFAA3BB3	FASTA	117	13,659
	10 20 30 40 50 60 MALYEHIFIV RPDVSPAQME SLLEETKALI EEKGGKTGKI EYWGLRNLSY RINKSRKGHY 70 80 90 100 110 GLIDIDAEAD VINELERLQR LSEDVIRHMT LRVEAHTEEP SAILTKKDDR RGRRERN

References

[1]

"Complete sequence of Maricaulis maris MCS10." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Viollier P., Stephens C., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MCS10.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000449 Genomic DNA. Translation: ABI65505.1.
RefSeq	YP_756443.1. NC_008347.1.
3D structure databases
ProteinModelPortal	Q0AQD2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0AQD2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4284821.
GenomeReviews	Gene locus Mmar10_1212 in contig CP000449_GR.
KEGG	mmr:Mmar10_1212.
PATRIC	22450496. VBIMarMar77530_1241.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0360.
HOGENOM	HBG747554.
OMA	ITEASPM.
PhylomeDB	Q0AQD2.
ProtClustDB	PRK00453.
Enzyme and pathway databases
BioCyc	MMAR394221:MMAR10_1212-MONOMER.
Family and domain databases
HAMAP	MF_00360. Ribosomal_S6. [Tree]
InterPro	IPR000529. Ribosomal_S6. IPR020815. Ribosomal_S6_CS. IPR020814. Ribosomal_S6_plastid/chlpt. IPR014717. Transl_elong_EF1B/ribosomal_S6. [Graphical view]
Gene3D	G3DSA:3.30.70.60. Transl_elong_EF1B/rib_con. 1 hit.
KO	K02990.
Pfam	PF01250. Ribosomal_S6. 1 hit. [Graphical view]
SUPFAM	SSF54995. Ribosomal_S6. 1 hit.
TIGRFAMs	TIGR00166. S6. 1 hit.
PROSITE	PS01048. RIBOSOMAL_S6. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS6_MARMM

Accession

Primary (citable) accession number: Q0AQD2

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	October 17, 2006
Last modified:	January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program