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Protein
Submitted name:

Riboflavin biosynthesis protein RibD

Gene

Mmar10_2499

Organism
Maricaulis maris (strain MCS10)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciMMAR394221:GHNB-2550-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Riboflavin biosynthesis protein RibDImported (EC:3.5.4.26Imported)
Gene namesi
Ordered Locus Names:Mmar10_2499Imported
OrganismiMaricaulis maris (strain MCS10)Imported
Taxonomic identifieri394221 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesHyphomonadaceaeMaricaulis
ProteomesiUP000001964 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ0ALQ8.

Interactioni

Protein-protein interaction databases

STRINGi394221.Mmar10_2499.

Structurei

3D structure databases

ProteinModelPortaliQ0ALQ8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0117.
HOGENOMiHOG000085050.
KOiK11752.
OMAiPMVRISA.
OrthoDBiEOG66F07R.

Family and domain databases

InterProiIPR016192. APOBEC/CMP_deaminase_Zn-bd.
IPR002125. CMP_dCMP_Zn-bd.
IPR016193. Cytidine_deaminase-like.
IPR004794. Eubact_RibD.
[Graphical view]
PfamiPF00383. dCMP_cyt_deam_1. 1 hit.
[Graphical view]
SUPFAMiSSF53927. SSF53927. 1 hit.
TIGRFAMsiTIGR00326. eubact_ribD. 1 hit.
PROSITEiPS00903. CYT_DCMP_DEAMINASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0ALQ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAIDDARYM DLAVALARAQ QGRTAPNPAV GCVLVRDGRI IATGATQDGG
60 70 80 90 100
RPHAERVALD AAGAEAAGAT AYVTLEPCAH HGQTPPCADG LIQAGIERAV
110 120 130 140 150
IACGDRFEQV SGRGLAILAA AGMTVETGLR ETDATSLYAG FFSRLASGLP
160 170 180 190 200
HIMPDARARG YDGELTARSL DEAKVQIRTF AEAGMNRIRV APDHPLADCD

WPTVMDG
Length:207
Mass (Da):21,582
Last modified:October 17, 2006 - v1
Checksum:i316911907F3C959F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000449 Genomic DNA. Translation: ABI66785.1.
RefSeqiWP_011644429.1. NC_008347.1.
YP_757723.1. NC_008347.1.

Genome annotation databases

EnsemblBacteriaiABI66785; ABI66785; Mmar10_2499.
KEGGimmr:Mmar10_2499.
PATRICi22453192. VBIMarMar77530_2564.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000449 Genomic DNA. Translation: ABI66785.1.
RefSeqiWP_011644429.1. NC_008347.1.
YP_757723.1. NC_008347.1.

3D structure databases

ProteinModelPortaliQ0ALQ8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi394221.Mmar10_2499.

Proteomic databases

PRIDEiQ0ALQ8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI66785; ABI66785; Mmar10_2499.
KEGGimmr:Mmar10_2499.
PATRICi22453192. VBIMarMar77530_2564.

Phylogenomic databases

eggNOGiCOG0117.
HOGENOMiHOG000085050.
KOiK11752.
OMAiPMVRISA.
OrthoDBiEOG66F07R.

Enzyme and pathway databases

BioCyciMMAR394221:GHNB-2550-MONOMER.

Family and domain databases

InterProiIPR016192. APOBEC/CMP_deaminase_Zn-bd.
IPR002125. CMP_dCMP_Zn-bd.
IPR016193. Cytidine_deaminase-like.
IPR004794. Eubact_RibD.
[Graphical view]
PfamiPF00383. dCMP_cyt_deam_1. 1 hit.
[Graphical view]
SUPFAMiSSF53927. SSF53927. 1 hit.
TIGRFAMsiTIGR00326. eubact_ribD. 1 hit.
PROSITEiPS00903. CYT_DCMP_DEAMINASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MCS10Imported.

Entry informationi

Entry nameiQ0ALQ8_MARMM
AccessioniPrimary (citable) accession number: Q0ALQ8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: April 29, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.