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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Nitrosomonas eutropha (strain C91)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotation
Gene namesi
Name:rplMUniRule annotation
Ordered Locus Names:Neut_0762
OrganismiNitrosomonas eutropha (strain C91)
Taxonomic identifieri335283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesNitrosomonadaceaeNitrosomonas
Proteomesi
  • UP000001966 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000554231 – 14450S ribosomal protein L13Add BLAST144

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi335283.Neut_0762.

Structurei

3D structure databases

ProteinModelPortaliQ0AI00.
SMRiQ0AI00.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UM5. Bacteria.
COG0102. LUCA.
HOGENOMiHOG000225286.
KOiK02871.
OMAiVLMGKHK.
OrthoDBiPOG091H013T.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0AI00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTFSAKPHE VKHEWFVVDA TDKVLGRLAA AIAHRLRGKH KPIYTPHVDT
60 70 80 90 100
GDYIVVINVD KLRVTGNKAE DKIYYRHSGY PGGLYETTFK KMHARFPARP
110 120 130 140
LEKAVKGMLP KGPLGYAMIK KLKIYAGDIH PHAAQQPQSL EINA
Length:144
Mass (Da):16,212
Last modified:October 17, 2006 - v1
Checksum:i22522B3EA788C7DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000450 Genomic DNA. Translation: ABI59032.1.
RefSeqiWP_011633857.1. NC_008344.1.

Genome annotation databases

EnsemblBacteriaiABI59032; ABI59032; Neut_0762.
KEGGinet:Neut_0762.

Similar proteinsi

Entry informationi

Entry nameiRL13_NITEC
AccessioniPrimary (citable) accession number: Q0AI00
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 17, 2006
Last modified: June 7, 2017
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families