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Q0AGJ0

- GLGB_NITEC

UniProt

Q0AGJ0 - GLGB_NITEC

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Nitrosomonas eutropha (strain C91)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei415 – 4151NucleophileUniRule annotation
Active sitei468 – 4681Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciNEUT335283:GHT6-1318-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:Neut_1291
OrganismiNitrosomonas eutropha (strain C91)
Taxonomic identifieri335283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesNitrosomonadaceaeNitrosomonas
ProteomesiUP000001966: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7327321,4-alpha-glucan branching enzyme GlgBPRO_1000044987Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi335283.Neut_1291.

Structurei

3D structure databases

ProteinModelPortaliQ0AGJ0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiFERTEND.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0AGJ0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKSLPFPSPS RDLAGDSAQS LLLAARLHAP GSYLGIHSVP GGELVRVFQP
60 70 80 90 100
YMSRVWLQTS SGFQVMECTH DAGIFEWKGE AVTRPYLLRL EHAETGVIEE
110 120 130 140 150
RYDPYAFPVQ ISGHDLYLFN EGRLLQAYHM LGTHQVKNQG VTGTRFAVWA
160 170 180 190 200
PNAERVSVVG DFNHWDGRVC PMMARDHSGV WELFIPDLPG GTLYKYEIRN
210 220 230 240 250
HSTGEILLKT DPYATRYELR PNNAALTPVE SRYEWQDNDW MVQRAGWDWL
260 270 280 290 300
HAPVNIYELH VGSWKRHPDG SFYSYQELAD HLIPYLQEMG YSHVELLPIS
310 320 330 340 350
EHPLDESWGY QVTGYFAATS RYGNPEAFMY FVDKCHQAGI GVILDWVPAH
360 370 380 390 400
FPQDSFSLAR FDGTALYEHE DPRLGYHQDW GTYIFNYGRS EVKSFLLSSA
410 420 430 440 450
HYWLSVFHID GLRVDAVASM LYLDYSRKEG EWLPNRFGGR ENLDAIDFLR
460 470 480 490 500
ELNTMVHGEF SGALTFAEES TSWPAVSRPT YLGGLGFSMK WNMGWMNDTL
510 520 530 540 550
NYMQLDPIHR HYHHNELTFN QLYAYTENFI LPLSHDEVVH GKKSLLDKMS
560 570 580 590 600
GDVWQMFANL RLLFTYQMTC PGKKINFMGN EFAQGREWRV NHELDWYLLE
610 620 630 640 650
RDPHRGIQML LRNLNHLYLD TPALHELDFF TEGFSWIDCH DSEQSVISYQ
660 670 680 690 700
RRARDGSFML VILNFTPVPR TGYRVGVPES RTYQEVFNSD STYYGGSNIG
710 720 730
NPGDIVPTGQ QWSGQVDSII ITLPPLAGII LI
Length:732
Mass (Da):84,190
Last modified:October 17, 2006 - v1
Checksum:i31528AA01C8AC120
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000450 Genomic DNA. Translation: ABI59542.1.
RefSeqiYP_747507.1. NC_008344.1.

Genome annotation databases

EnsemblBacteriaiABI59542; ABI59542; Neut_1291.
GeneIDi4272035.
KEGGinet:Neut_1291.
PATRICi22719903. VBINitEut7577_1611.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000450 Genomic DNA. Translation: ABI59542.1 .
RefSeqi YP_747507.1. NC_008344.1.

3D structure databases

ProteinModelPortali Q0AGJ0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 335283.Neut_1291.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABI59542 ; ABI59542 ; Neut_1291 .
GeneIDi 4272035.
KEGGi net:Neut_1291.
PATRICi 22719903. VBINitEut7577_1611.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi FERTEND.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci NEUT335283:GHT6-1318-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation."
    Stein L.Y., Arp D.J., Berube P.M., Chain P.S., Hauser L., Jetten M.S., Klotz M.G., Larimer F.W., Norton J.M., Op den Camp H.J.M., Shin M., Wei X.
    Environ. Microbiol. 9:2993-3007(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C91.

Entry informationi

Entry nameiGLGB_NITEC
AccessioniPrimary (citable) accession number: Q0AGJ0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 17, 2006
Last modified: November 26, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3