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Q0AGJ0

- GLGB_NITEC

UniProt

Q0AGJ0 - GLGB_NITEC

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Protein
1,4-alpha-glucan branching enzyme GlgB
Gene
glgB, Neut_1291
Organism
Nitrosomonas eutropha (strain C91)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei415 – 4151Nucleophile By similarity
Active sitei468 – 4681Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciNEUT335283:GHT6-1318-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:Neut_1291
OrganismiNitrosomonas eutropha (strain C91)
Taxonomic identifieri335283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNitrosomonadalesNitrosomonadaceaeNitrosomonas
ProteomesiUP000001966: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7327321,4-alpha-glucan branching enzyme GlgBUniRule annotation
PRO_1000044987Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi335283.Neut_1291.

Structurei

3D structure databases

ProteinModelPortaliQ0AGJ0.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiFERTEND.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0AGJ0-1 [UniParc]FASTAAdd to Basket

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MKSLPFPSPS RDLAGDSAQS LLLAARLHAP GSYLGIHSVP GGELVRVFQP    50
YMSRVWLQTS SGFQVMECTH DAGIFEWKGE AVTRPYLLRL EHAETGVIEE 100
RYDPYAFPVQ ISGHDLYLFN EGRLLQAYHM LGTHQVKNQG VTGTRFAVWA 150
PNAERVSVVG DFNHWDGRVC PMMARDHSGV WELFIPDLPG GTLYKYEIRN 200
HSTGEILLKT DPYATRYELR PNNAALTPVE SRYEWQDNDW MVQRAGWDWL 250
HAPVNIYELH VGSWKRHPDG SFYSYQELAD HLIPYLQEMG YSHVELLPIS 300
EHPLDESWGY QVTGYFAATS RYGNPEAFMY FVDKCHQAGI GVILDWVPAH 350
FPQDSFSLAR FDGTALYEHE DPRLGYHQDW GTYIFNYGRS EVKSFLLSSA 400
HYWLSVFHID GLRVDAVASM LYLDYSRKEG EWLPNRFGGR ENLDAIDFLR 450
ELNTMVHGEF SGALTFAEES TSWPAVSRPT YLGGLGFSMK WNMGWMNDTL 500
NYMQLDPIHR HYHHNELTFN QLYAYTENFI LPLSHDEVVH GKKSLLDKMS 550
GDVWQMFANL RLLFTYQMTC PGKKINFMGN EFAQGREWRV NHELDWYLLE 600
RDPHRGIQML LRNLNHLYLD TPALHELDFF TEGFSWIDCH DSEQSVISYQ 650
RRARDGSFML VILNFTPVPR TGYRVGVPES RTYQEVFNSD STYYGGSNIG 700
NPGDIVPTGQ QWSGQVDSII ITLPPLAGII LI 732
Length:732
Mass (Da):84,190
Last modified:October 17, 2006 - v1
Checksum:i31528AA01C8AC120
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000450 Genomic DNA. Translation: ABI59542.1.
RefSeqiWP_011634361.1. NC_008344.1.
YP_747507.1. NC_008344.1.

Genome annotation databases

EnsemblBacteriaiABI59542; ABI59542; Neut_1291.
GeneIDi4272035.
KEGGinet:Neut_1291.
PATRICi22719903. VBINitEut7577_1611.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000450 Genomic DNA. Translation: ABI59542.1 .
RefSeqi WP_011634361.1. NC_008344.1.
YP_747507.1. NC_008344.1.

3D structure databases

ProteinModelPortali Q0AGJ0.
ModBasei Search...

Protein-protein interaction databases

STRINGi 335283.Neut_1291.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABI59542 ; ABI59542 ; Neut_1291 .
GeneIDi 4272035.
KEGGi net:Neut_1291.
PATRICi 22719903. VBINitEut7577_1611.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi FERTEND.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci NEUT335283:GHT6-1318-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation."
    Stein L.Y., Arp D.J., Berube P.M., Chain P.S., Hauser L., Jetten M.S., Klotz M.G., Larimer F.W., Norton J.M., Op den Camp H.J.M., Shin M., Wei X.
    Environ. Microbiol. 9:2993-3007(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C91.

Entry informationi

Entry nameiGLGB_NITEC
AccessioniPrimary (citable) accession number: Q0AGJ0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 17, 2006
Last modified: September 3, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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