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Q0AF20 (Q0AF20_NITEC) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribose-5-phosphate isomerase A HAMAP MF_00170
EC=5.3.1.6 HAMAP MF_00170
Alternative name(s):
Phosphoriboisomerase A HAMAP MF_00170
Gene names
Name:rpiA HAMAP MF_00170
Ordered Locus Names:Neut_1829
OrganismNitrosomonas eutropha (strain C91) [Complete proteome] [HAMAP] EMBL ABI60062.1
Taxonomic identifier335283 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Nitrosomonadales › Nitrosomonadaceae › Nitrosomonas

Protein attributes

Sequence length241 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
Q0AF20 [UniParc].

Last modified October 17, 2006. Version 1.
Checksum: 3F3EE52648118EC9

FASTA24126,178
        10         20         30         40         50         60 
MRKRSESFSM RALFQEPIIK IIMTQDEQKQ AVAQAALQYV QVGEIIGIGT GSTTNLFIDE 

        70         80         90        100        110        120 
LAKIKHKIEG AVASSEATAA RLKQHGIEVL SLNSVADLPV YIDGADEITR NMHMIKGGGG 

       130        140        150        160        170        180 
ALTREKIIAA VARKFICIAD QSKLVKVLGK FPLPVEVIPM ARSYVAREIA LLGGQPAWRQ 

       190        200        210        220        230        240 
DFTTDNGNVI LDIHNLNIMN PVELESTLNQ ITGVVTNGLF ARRGADVLLM GTDQGVETIT 


I

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References

[1]"Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation."
Stein L.Y., Arp D.J., Berube P.M., Chain P.S., Hauser L., Jetten M.S., Klotz M.G., Larimer F.W., Norton J.M., Op den Camp H.J.M., Shin M., Wei X.
Environ. Microbiol. 9:2993-3007(2007) [PubMed: 17991028] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000450 Genomic DNA. Translation: ABI60062.1.
RefSeqYP_748027.1. NC_008344.1.

3D structure databases

ProteinModelPortalQ0AF20.
SMRQ0AF20. Positions 23-239.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0AF20.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4272618.
GenomeReviewsGene locus Neut_1829 in contig CP000450_GR.
KEGGnet:Neut_1829.
NMPDRfig|335283.3.peg.817.
PATRIC22721168. VBINitEut7577_2230.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0120.
HOGENOMHBG515603.
OMANLSLYVD.
PhylomeDBQ0AF20.
ProtClustDBPRK00702.

Family and domain databases

HAMAPMF_00170. Rib_5P_isom_A.
[Tree]
InterProIPR004788. Ribose5P_isomerase_typA.
IPR020672. Ribose5P_isomerase_typA_subgr.
IPR014036. Tscrpt_reg_HTH_DeoR.
[Graphical view]
KOK01807.
PANTHERPTHR11934. RpiA. 1 hit.
PfamPF00455. DeoR. 1 hit.
PF06026. Rib_5-P_isom_A. 1 hit.
[Graphical view]
TIGRFAMsTIGR00021. RpiA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0AF20_NITEC
AccessionPrimary (citable) accession number: Q0AF20
Entry history
Integrated into UniProtKB/TrEMBL: October 17, 2006
Last sequence update: October 17, 2006
Last modified: December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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