Reviewed, UniProtKB/Swiss-Prot Q0ACJ4 (RPIA_ALHEH)

Names and origin

Protein names

Recommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	Mlg_0086

Organism

Alkalilimnicola ehrlichei (strain MLHE-1) [Complete proteome] [HAMAP]

Taxonomic identifier

187272 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Ectothiorhodospiraceae › Alkalilimnicola

Protein attributes

Sequence length	221 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 221	221	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000016899

Sequences

	Sequence		Length	Mass (Da)
	Q0ACJ4-1 [UniParc]. Last modified October 17, 2006. Version 1. Checksum: EAB25431596A7FB4	FASTA	221	23,654
	10 20 30 40 50 60 MMSADQGKRM AAEAAMEYVE ENTVIGVGTG STVNFFIDAL ADMKARIDGT VSSSEASTAR 70 80 90 100 110 120 LRQYGIPVLD LNEVGTMPIY VDGADESNRF LQLIKGGGGA LTREKIVAAA AERFVCVADE 130 140 150 160 170 180 SKLVDVLGEF PLPVEVIPMA RSYVARELVK LGGRPQLRSG FTTDNGNVIL DVRGLKIMEP 190 200 210 220 IKLEQQINNI PGVVTNGLFA LRPADVLLLG TAEGVRKLTA E

References

[1]

"Complete sequence of Alkalilimnicola ehrilichei MLHE-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Oremland R.S., Hoeft S.E., Switzer-Blum J., Kulp T., King G., Tabita R., Witte B., Santini J.M., Basu P., Hollibaugh J.T., Xie G., Stolz J.F., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000453 Genomic DNA. Translation: ABI55443.1.
RefSeq	YP_740933.1.
3D structure databases
SMR	Q0ACJ4. Positions 2-218.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0ACJ4.
Genome annotation databases
GeneID	4269914.
GenomeReviews	Gene locus Mlg_0086 in contig CP000453_GR.
KEGG	aeh:Mlg_0086.
NMPDR	fig|187272.6.peg.81.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0120.
HOGENOM	HBG515603.
OMA	VFDLNSV.
PhylomeDB	Q0ACJ4.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_ALHEH

Accession

Primary (citable) accession number: Q0ACJ4

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	October 17, 2006
Last modified:	February 9, 2010
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)