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Q09AM5 (Q09AM5_STIAD) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Alpha amylase catalytic region EMBL ADO74893.1
Gene names
Ordered Locus Names:STAUR_7137 EMBL ADO74893.1
ORF Names:STIAU_8552 EMBL EAU68841.1
OrganismStigmatella aurantiaca (strain DW4/3-1) [Complete proteome] [HAMAP] EMBL EAU68841.1
Taxonomic identifier378806 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeCystobacteraceaeStigmatella

Protein attributes

Sequence length494 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q09AM5 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 8B5DAB487ECA266C

FASTA49453,923
        10         20         30         40         50         60 
MGCRHAPPAP PAAPAIEAAP APAPTAPAPA SRPWADEVLY FVVVDRFADG DPAHNVPGDV 

        70         80         90        100        110        120 
SAPGTFHGGD LKGLTQQLDE LTSLGITALW ITPVVKNIDG FVTGSGFPDW GYHGYWADDF 

       130        140        150        160        170        180 
HAMDPRFGTE EELRTLVKEA HARGIRVLLD VVYNHTGYGS RYLKMPETKD WLRSEETGTC 

       190        200        210        220        230        240 
GQDNNITSCV AGLPDFKTER PEVAQYLIDA QIAWAKRSGV DGFRLDTLKH LEHGFWQEHR 

       250        260        270        280        290        300 
RRTREALGPD FFLLGELWGG ELASLDKYFV GDEVDAGFDF SFQGSTLAFL LGRGRTVAFD 

       310        320        330        340        350        360 
RYLQSRGKIR PGYHLSHFLS SHDVPGALFQ LGGDKVRFQL AAVLQLTTAG IPTIYYGEEV 

       370        380        390        400        410        420 
ARPGGDWPAN RDDMPWGARD VKPGAGKPRD EALRKTYQKL ISIRRAHPAL SRGTHRGLST 

       430        440        450        460        470        480 
DGDLYVFLRH DAASGDAVMV AVNRGQTPAS VSLPWPEAWG TPAAEDLLNG GRLEGPTLEL 

       490 
AVEPLSARIL GKPG 

« Hide

References

« Hide 'large scale' references
[1]Nierman W.C.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DW4/3-1 EMBL EAU68841.1.
[2]"Evolution of fruiting body formation in Myxococcales: a comparative genomic analysis."
Huntley S., Hamann N., Wegener-Feldbruegge S., Treuner-Lange A., Kube M., Reinhardt R., Klages S., Mueller R., Ronning C.M., Nierman W.C., Sogaard-Andersen L.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DW4/3-1.
[3]"Comparative genomic analysis of fruiting body formation in Myxococcales."
Huntley S., Hamann N., Wegener-Feldbrugge S., Treuner-Lange A., Kube M., Reinhardt R., Klages S., Muller R., Ronning C.M., Nierman W.C., Sogaard-Andersen L.
Mol. Biol. Evol. 28:1083-1097(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DW4/3-1 EMBL ADO74893.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002271 Genomic DNA. Translation: ADO74893.1.
AAMD01000012 Genomic DNA. Translation: EAU68841.1.
RefSeqYP_003956720.1. NC_014623.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO74893; ADO74893; STAUR_7137.
EAU68841; EAU68841; STIAU_8552.
GeneID9880630.
KEGGsur:STAUR_7137.
PATRIC38550474. VBIStiAur43712_1352.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycSAUR378806:GCZI-7137-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ09AM5_STIAD
AccessionPrimary (citable) accession number: Q09AM5
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: July 9, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)