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Protein
Submitted name:

DeHydrogenases, Short chain

Gene

dhs-6

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
DeHydrogenases, Short chainImported
Gene namesi
Name:dhs-6Imported
ORF Names:C17G10.8Imported, CELE_C17G10.8Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiC17G10.8; CE02490; WBGene00000970; dhs-6.

PTM / Processingi

Proteomic databases

EPDiQ09979.
PaxDbiQ09979.

Interactioni

Protein-protein interaction databases

STRINGi6239.C17G10.8.2.

Structurei

3D structure databases

ProteinModelPortaliQ09979.
SMRiQ09979. Positions 3-275, 322-418.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini318 – 41093SCP2InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0725. Eukaryota.
KOG4170. Eukaryota.
COG1028. LUCA.
GeneTreeiENSGT00730000111071.
InParanoidiQ09979.
OMAiKTQAVYQ.
PhylomeDBiQ09979.

Family and domain databases

Gene3Di3.30.1050.10. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR003033. SCP2_sterol-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 3 hits.
PfamiPF00106. adh_short. 1 hit.
PF02036. SCP2. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
SUPFAMiSSF51735. SSF51735. 1 hit.
SSF55718. SSF55718. 1 hit.

Sequencei

Sequence statusi: Complete.

Q09979-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFNTGKFVGR TVLITGASRG IGKEIALKLA KDGANIVVAA KTATAHPKLP
60 70 80 90 100
GTIYSAAEEI EKAGGKALPC IVDVRDEASV KASVEEAVKK FGGIDILINN
110 120 130 140 150
ASAISLTDTE NTEMKRYDLM HSINTRGTFL MTKTCLPYLK SGKNPHVLNI
160 170 180 190 200
SPPLLMETRW FANHVAYTMA KYGMSMCVLG QHEEFRPHGI AVNALWPLTA
210 220 230 240 250
IWTAAMEMLS DKGGEAGSRK PSIMADAAYA VLSKNSKDFT GNFCIDEDIL
260 270 280 290 300
KAEGVTDFDR YACVPDAPLM PDFFIPAGTY DHKFSSGAQI GKKNKTHEAG
310 320 330 340 350
VVEEEIKQIF TSAKRLLNAD IVKKTGFVYE FLLKDPTTKS ERIITLDLKN
360 370 380 390 400
GEGALTDKKA SGKADVKFTL APEHFAPLFT GKLRPTTALM TKKLQISGDM
410
PGAMKLESLL RKFTEGKL
Length:418
Mass (Da):45,476
Last modified:October 1, 2001 - v3
Checksum:i54BFF359207871D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD64960.1.
RefSeqiNP_001021972.1. NM_001026801.5.
UniGeneiCel.16911.

Genome annotation databases

EnsemblMetazoaiC17G10.8; C17G10.8; WBGene00000970.
GeneIDi3565470.
KEGGicel:CELE_C17G10.8.
UCSCiC17G10.8.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD64960.1.
RefSeqiNP_001021972.1. NM_001026801.5.
UniGeneiCel.16911.

3D structure databases

ProteinModelPortaliQ09979.
SMRiQ09979. Positions 3-275, 322-418.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C17G10.8.2.

Proteomic databases

EPDiQ09979.
PaxDbiQ09979.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC17G10.8; C17G10.8; WBGene00000970.
GeneIDi3565470.
KEGGicel:CELE_C17G10.8.
UCSCiC17G10.8.1. c. elegans.

Organism-specific databases

CTDi3565470.
WormBaseiC17G10.8; CE02490; WBGene00000970; dhs-6.

Phylogenomic databases

eggNOGiKOG0725. Eukaryota.
KOG4170. Eukaryota.
COG1028. LUCA.
GeneTreeiENSGT00730000111071.
InParanoidiQ09979.
OMAiKTQAVYQ.
PhylomeDBiQ09979.

Miscellaneous databases

NextBioi956619.

Family and domain databases

Gene3Di3.30.1050.10. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR003033. SCP2_sterol-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 3 hits.
PfamiPF00106. adh_short. 1 hit.
PF02036. SCP2. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
SUPFAMiSSF51735. SSF51735. 1 hit.
SSF55718. SSF55718. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ09979_CAEEL
AccessioniPrimary (citable) accession number: Q09979
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: October 1, 2001
Last modified: April 13, 2016
This is version 115 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.