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Protein

Uncharacterized transcriptional regulatory protein C1F7.11c

Gene

SPAC1F7.11c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi22 – 5029Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transcriptional regulatory protein C1F7.11c
Gene namesi
ORF Names:SPAC1F7.11c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC1F7.11c.
PomBaseiSPAC1F7.11c.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 782782Uncharacterized transcriptional regulatory protein C1F7.11cPRO_0000115007Add
BLAST

Proteomic databases

MaxQBiQ09922.

Interactioni

Protein-protein interaction databases

BioGridi278041. 11 interactions.
MINTiMINT-4696435.

Structurei

3D structure databases

ProteinModelPortaliQ09922.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 Zn(2)-C6 fungal-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

InParanoidiQ09922.
OMAiQMANERS.
OrthoDBiEOG7C8GRS.
PhylomeDBiQ09922.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR007219. Transcription_factor_dom_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF04082. Fungal_trans. 1 hit.
[Graphical view]
SMARTiSM00906. Fungal_trans. 1 hit.
SM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q09922-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSASGKKPGT KGTKRHRKIT SCRECHRLKL KCDRVWPCEN CKKRGIPNLC
60 70 80 90 100
PNGILVSVSD KLIKLLLSRI DTLQNCVKSV SPNHESLIVS SDDQKIIDDI
110 120 130 140 150
YEKFGEKPAE DTKDENRSQP IHDPDHPTLE DVAQMLGKLK VGSHGYFNYY
160 170 180 190 200
GASSSRSCIP QQDPNSEEED TFMQRPFLYP ASSYNSALHW SHRIPNILNP
210 220 230 240 250
STLCDMLPVP QFAVRLMGLY FDNVGWSSHI IHRPSFEEAC LNLYSAAPDR
260 270 280 290 300
TNPQPQFLSL TYMVFCLGTL FTSPVLVRNR YSLAHEFFLR AQLCFDISVS
310 320 330 340 350
GFTPSLDSVV AVMLMAQYSY FCDRLERTNF AWNCIGLAIR LAVAMGLHRD
360 370 380 390 400
GEVFELSAFQ LHMRRLIWSE LLFFDRMLSM SLGRPFAISN DQTNVHEPSN
410 420 430 440 450
VCDIQISSQS NCIPDPSYER TEASFTIFKA KLSKVIASVL DRAFRFTPPS
460 470 480 490 500
YSEVEALTEQ FKVLENELPD YMRISRDTPN LPPMVIIEQY SAKFLIQQAL
510 520 530 540 550
LYLHRPWFVR AATRKEEREH YKSSFNLCTS VSHELIHNLY SLMCLVPVEP
560 570 580 590 600
LRWWVFRFHS LNAGIIQAAY ALCFPNTDYA LTAYNDLQYI CRIFEHLKGG
610 620 630 640 650
FMFSNKDYDF LIQLKSKVFN RFQLSSQGLT PEDLTEDVPF LHFNVPSSRP
660 670 680 690 700
NSKSPDDSSM RAEKAAQLDG LGLSSDDLNT AQSENLPIYE QENPLLFDSL
710 720 730 740 750
SWHVPKDDTR NDKSPLVPTW NADMMFEEEQ KPIVPIDLSS MQDDQVSSLT
760 770 780
TNEEFDPLSS FQASHSGSNF WTNMMNEMGI PK
Length:782
Mass (Da):89,378
Last modified:February 1, 1996 - v1
Checksum:iB08DAEC986BF1CF7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAA91958.1.
PIRiS62583.
RefSeqiNP_594497.1. NM_001019926.2.

Genome annotation databases

EnsemblFungiiSPAC1F7.11c.1; SPAC1F7.11c.1:pep; SPAC1F7.11c.
GeneIDi2541541.
KEGGispo:SPAC1F7.11c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAA91958.1.
PIRiS62583.
RefSeqiNP_594497.1. NM_001019926.2.

3D structure databases

ProteinModelPortaliQ09922.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi278041. 11 interactions.
MINTiMINT-4696435.

Proteomic databases

MaxQBiQ09922.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC1F7.11c.1; SPAC1F7.11c.1:pep; SPAC1F7.11c.
GeneIDi2541541.
KEGGispo:SPAC1F7.11c.

Organism-specific databases

EuPathDBiFungiDB:SPAC1F7.11c.
PomBaseiSPAC1F7.11c.

Phylogenomic databases

InParanoidiQ09922.
OMAiQMANERS.
OrthoDBiEOG7C8GRS.
PhylomeDBiQ09922.

Miscellaneous databases

NextBioi20802638.
PROiQ09922.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR007219. Transcription_factor_dom_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF04082. Fungal_trans. 1 hit.
[Graphical view]
SMARTiSM00906. Fungal_trans. 1 hit.
SM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.

Entry informationi

Entry nameiYAKB_SCHPO
AccessioniPrimary (citable) accession number: Q09922
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: April 13, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.