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Protein

Uncharacterized protein C2F7.07c

Gene

SPAC2F7.07c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri263 – 31250PHD-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri406 – 45954PHD-type 2PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C2F7.07c
Gene namesi
ORF Names:SPAC2F7.07c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC2F7.07c.
PomBaseiSPAC2F7.07c.

Subcellular locationi

GO - Cellular componenti

  • mitotic spindle Source: PomBase
  • nucleus Source: PomBase
  • Rpd3S complex Source: PomBase
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 607607Uncharacterized protein C2F7.07cPRO_0000116383Add
BLAST

Proteomic databases

MaxQBiQ09698.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

BioGridi277928. 347 interactions.
DIPiDIP-29347N.
MINTiMINT-4694206.

Structurei

3D structure databases

ProteinModelPortaliQ09698.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 2 PHD-type zinc fingers.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri263 – 31250PHD-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri406 – 45954PHD-type 2PROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

InParanoidiQ09698.
OMAiESENFND.
OrthoDBiEOG72C57X.

Family and domain databases

Gene3Di3.30.40.10. 2 hits.
InterProiIPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF00628. PHD. 1 hit.
[Graphical view]
SMARTiSM00249. PHD. 2 hits.
[Graphical view]
SUPFAMiSSF57903. SSF57903. 2 hits.
PROSITEiPS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q09698-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDAKPWNHTS EAFQASILED LKIIQKAGAE RNAKSSHGSI NSRSASPNKA
60 70 80 90 100
TSRRNRAQNG NSNGRASVDN SDDGSKDDLD YSPSVKRKHV NGEGAEKGDH
110 120 130 140 150
DTSNNGPSIT KLRRKVRRTY DTKDGFVAWN TLDDDFRPIV PDQERSRKIN
160 170 180 190 200
PQKGNNNNLL KENKSLKTTA KDLSDISSSS MKKANNSSKP LFSGKLTFKA
210 220 230 240 250
NIPVPTSEVV TENNVTRNVT VYSNQKHLGN ESENFNDMEG RAEDISSNEL
260 270 280 290 300
LPTPEEYPYR YNNDYCSACH GPGNFLCCET CPNSFHFTCI DPPIEEKNLP
310 320 330 340 350
DDAWYCNECK HHSLYNELDE QEELESNVKE EGTMVDVWMQ LCTYIDSHNP
360 370 380 390 400
IQFHLPHSIS SFFRGVGSGV MGEYIETDVL KHLKSSRRSN GEERDPLLLK
410 420 430 440 450
SKSGTPILCF RCHKSALVSQ SILACDYCNS YWHPDCLNPP LATLPSNLRK
460 470 480 490 500
WKCPNHSDHV TPRYRLPEKA KVIRVGLPRG FKNKGNIVID ENEDEPSVQT
510 520 530 540 550
IQLQGKIRVV PSKPFKLNFL EQIRDNVINL RKMVEQDEQL CIETFSKFDF
560 570 580 590 600
YATRDCELPL RILCDVANDN LENDDYVLAL RDLLRISKWD PNQPVPAPFD

LANLLSY
Length:607
Mass (Da):68,777
Last modified:November 1, 1995 - v1
Checksum:i433CE6520BA4714C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAA90494.1.
PIRiT38555. S58151.
RefSeqiNP_592978.1. NM_001018378.2.

Genome annotation databases

EnsemblFungiiSPAC2F7.07c.1; SPAC2F7.07c.1:pep; SPAC2F7.07c.
GeneIDi2541422.
KEGGispo:SPAC2F7.07c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAA90494.1.
PIRiT38555. S58151.
RefSeqiNP_592978.1. NM_001018378.2.

3D structure databases

ProteinModelPortaliQ09698.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi277928. 347 interactions.
DIPiDIP-29347N.
MINTiMINT-4694206.

Proteomic databases

MaxQBiQ09698.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC2F7.07c.1; SPAC2F7.07c.1:pep; SPAC2F7.07c.
GeneIDi2541422.
KEGGispo:SPAC2F7.07c.

Organism-specific databases

EuPathDBiFungiDB:SPAC2F7.07c.
PomBaseiSPAC2F7.07c.

Phylogenomic databases

InParanoidiQ09698.
OMAiESENFND.
OrthoDBiEOG72C57X.

Miscellaneous databases

PROiQ09698.

Family and domain databases

Gene3Di3.30.40.10. 2 hits.
InterProiIPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF00628. PHD. 1 hit.
[Graphical view]
SMARTiSM00249. PHD. 2 hits.
[Graphical view]
SUPFAMiSSF57903. SSF57903. 2 hits.
PROSITEiPS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.

Entry informationi

Entry nameiYA27_SCHPO
AccessioniPrimary (citable) accession number: Q09698
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 1, 1995
Last modified: July 6, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.