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Protein
Submitted name:

4-aminobutyrate transaminase

Gene

gabT

Organism
Stigmatella aurantiaca (strain DW4/3-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSAUR378806:GCZI-3537-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate transaminaseImported (EC:2.6.1.19Imported)
Gene namesi
Name:gabTImported
Ordered Locus Names:STAUR_3537Imported
ORF Names:STIAU_4930Imported
OrganismiStigmatella aurantiaca (strain DW4/3-1)Imported
Taxonomic identifieri378806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeCystobacteraceaeStigmatella
ProteomesiUP000001351: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ094Z5.
SMRiQ094Z5. Positions 3-422.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK00823.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q094Z5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSDNNVNLLR RKDAATPRGV GVMAPFFVSR AENSELWDVE GRRFIDFAGG
60 70 80 90 100
IAVLNTGHRH PRVVEAVKAQ LDAFTHSAYQ IVPYEAYVRL AERLNRLTPG
110 120 130 140 150
AFAKKTTFFS TGAEAIENAV KIARSATGRS GIIAFSGGFH GRTMMGLALT
160 170 180 190 200
GKVVPYKAGF GPFPPEVYHV PFPIALHGIS VEDTLRAFQN LFKADIEPKR
210 220 230 240 250
VAAILIEPVQ GEGGFYVAPP ELMRSLRKLC DEHGILLIAD EVQTGFARTG
260 270 280 290 300
KWFAMDHHDV HPDLIVTAKS LAGGFPLSAV TGRAEVMDAP EPGGLGGTYA
310 320 330 340 350
GNPLAIAAAN AVLDIIEDEG LVKRANELGD VLRIKLEGLK AKVPQMAEVR
360 370 380 390 400
GLGAMLAVEF CQPGGHTPDT EFTKVVKARA LEKGLMLLTC GVYSNVIRFL
410 420
FPLTVPEPVF KEGLSILESA LTG
Length:423
Mass (Da):45,540
Last modified:October 31, 2006 - v1
Checksum:i67007F9A46DDA26B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002271 Genomic DNA. Translation: ADO71327.1.
AAMD01000036 Genomic DNA. Translation: EAU67305.1.
RefSeqiYP_003953154.1. NC_014623.1.

Genome annotation databases

EnsemblBacteriaiADO71327; ADO71327; STAUR_3537.
EAU67305; EAU67305; STIAU_4930.
GeneIDi9877030.
KEGGisur:STAUR_3537.
PATRICi38553478. VBIStiAur43712_2838.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002271 Genomic DNA. Translation: ADO71327.1.
AAMD01000036 Genomic DNA. Translation: EAU67305.1.
RefSeqiYP_003953154.1. NC_014623.1.

3D structure databases

ProteinModelPortaliQ094Z5.
SMRiQ094Z5. Positions 3-422.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO71327; ADO71327; STAUR_3537.
EAU67305; EAU67305; STIAU_4930.
GeneIDi9877030.
KEGGisur:STAUR_3537.
PATRICi38553478. VBIStiAur43712_2838.

Phylogenomic databases

KOiK00823.

Enzyme and pathway databases

BioCyciSAUR378806:GCZI-3537-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Nierman W.C.
    Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DW4/3-1Imported.
  2. "Evolution of fruiting body formation in Myxococcales: a comparative genomic analysis."
    Huntley S., Hamann N., Wegener-Feldbruegge S., Treuner-Lange A., Kube M., Reinhardt R., Klages S., Mueller R., Ronning C.M., Nierman W.C., Sogaard-Andersen L.
    Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DW4/3-1Imported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DW4/3-1Imported.

Entry informationi

Entry nameiQ094Z5_STIAD
AccessioniPrimary (citable) accession number: Q094Z5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: January 7, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.