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Protein

Uncharacterized mitochondrial carrier C16C10.1

Gene

C16C10.1

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized mitochondrial carrier C16C10.1
Gene namesi
ORF Names:C16C10.1
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiC16C10.1; CE33519; WBGene00007622.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei40 – 6021Helical; Name=1Sequence analysisAdd
BLAST
Transmembranei125 – 14521Helical; Name=2Sequence analysisAdd
BLAST
Transmembranei178 – 19821Helical; Name=3Sequence analysisAdd
BLAST
Transmembranei225 – 24723Helical; Name=4Sequence analysisAdd
BLAST
Transmembranei269 – 28921Helical; Name=5Sequence analysisAdd
BLAST
Transmembranei327 – 34822Helical; Name=6Sequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 360360Uncharacterized mitochondrial carrier C16C10.1PRO_0000090704Add
BLAST

Proteomic databases

EPDiQ09461.
PaxDbiQ09461.

Interactioni

Protein-protein interaction databases

STRINGi6239.C16C10.1.2.

Structurei

3D structure databases

ProteinModelPortaliQ09461.
SMRiQ09461. Positions 40-353.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati34 – 153120Solcar 1Add
BLAST
Repeati172 – 25685Solcar 2Add
BLAST
Repeati266 – 35590Solcar 3Add
BLAST

Sequence similaritiesi

Contains 3 Solcar repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0761. Eukaryota.
ENOG410XQVP. LUCA.
GeneTreeiENSGT00790000123051.
HOGENOMiHOG000214473.
InParanoidiQ09461.
KOiK15119.
OMAiVECCKKQ.
OrthoDBiEOG79KPFV.
PhylomeDBiQ09461.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiIPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
[Graphical view]
PfamiPF00153. Mito_carr. 3 hits.
[Graphical view]
SUPFAMiSSF103506. SSF103506. 2 hits.
PROSITEiPS50920. SOLCAR. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q09461-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSPCESGKT TNCSGAPSSS CAKSVECCKK QLSVGVLQQV SASSSGAIVT
60 70 80 90 100
SLFMTPLDVV KIRLQQQTRP FPKGECFYYH NGLMEHVCVS CEVRKPCEWY
110 120 130 140 150
QRPGNFRGTA DAIVKIARHE GIRSLWSGLS PTMVMALPAT VFYFTTYDNL
160 170 180 190 200
SVWLKKKMCC RRAFSPEKWT PPDWSAAAVA GIVARTIAVT VVSPIEMIRT
210 220 230 240 250
KMQSKRLTYH EIGHLVRSSM ATKGISSFYL GWTPTMLRDI PFSGIYWAGY
260 270 280 290 300
DLFKTNLQRR QGPDHNPFVV SFVSGAAAGV VASIFTHPFD VIKTNCQIRI
310 320 330 340 350
GGSIDDMNKS ITTVIKDMYH SRGISAFSSG LVPRLVKVSP SCAIMISFYE
360
YFKFLFQKNH
Length:360
Mass (Da):40,014
Last modified:March 1, 2004 - v2
Checksum:i0992D25AA57A0BF3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46787 Genomic DNA. Translation: CAA86739.2.
PIRiT19322.
RefSeqiNP_497836.2. NM_065435.4.
UniGeneiCel.34020.

Genome annotation databases

EnsemblMetazoaiC16C10.1; C16C10.1; WBGene00007622.
GeneIDi175537.
KEGGicel:CELE_C16C10.1.
UCSCiC16C10.1.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46787 Genomic DNA. Translation: CAA86739.2.
PIRiT19322.
RefSeqiNP_497836.2. NM_065435.4.
UniGeneiCel.34020.

3D structure databases

ProteinModelPortaliQ09461.
SMRiQ09461. Positions 40-353.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C16C10.1.2.

Proteomic databases

EPDiQ09461.
PaxDbiQ09461.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC16C10.1; C16C10.1; WBGene00007622.
GeneIDi175537.
KEGGicel:CELE_C16C10.1.
UCSCiC16C10.1.2. c. elegans.

Organism-specific databases

CTDi175537.
WormBaseiC16C10.1; CE33519; WBGene00007622.

Phylogenomic databases

eggNOGiKOG0761. Eukaryota.
ENOG410XQVP. LUCA.
GeneTreeiENSGT00790000123051.
HOGENOMiHOG000214473.
InParanoidiQ09461.
KOiK15119.
OMAiVECCKKQ.
OrthoDBiEOG79KPFV.
PhylomeDBiQ09461.

Miscellaneous databases

PROiQ09461.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiIPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
[Graphical view]
PfamiPF00153. Mito_carr. 3 hits.
[Graphical view]
SUPFAMiSSF103506. SSF103506. 2 hits.
PROSITEiPS50920. SOLCAR. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiYQ51_CAEEL
AccessioniPrimary (citable) accession number: Q09461
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: March 1, 2004
Last modified: June 8, 2016
This is version 108 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.