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Protein

Uncharacterized mitochondrial carrier C16C10.1

Gene

C16C10.1

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized mitochondrial carrier C16C10.1
Gene namesi
ORF Names:C16C10.1
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiC16C10.1 ; CE33519 ; WBGene00007622

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei40 – 60Helical; Name=1Sequence analysisAdd BLAST21
Transmembranei125 – 145Helical; Name=2Sequence analysisAdd BLAST21
Transmembranei178 – 198Helical; Name=3Sequence analysisAdd BLAST21
Transmembranei225 – 247Helical; Name=4Sequence analysisAdd BLAST23
Transmembranei269 – 289Helical; Name=5Sequence analysisAdd BLAST21
Transmembranei327 – 348Helical; Name=6Sequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000907041 – 360Uncharacterized mitochondrial carrier C16C10.1Add BLAST360

Proteomic databases

EPDiQ09461
PaxDbiQ09461
PeptideAtlasiQ09461
PRIDEiQ09461

Expressioni

Gene expression databases

BgeeiWBGene00007622

Interactioni

Protein-protein interaction databases

STRINGi6239.C16C10.1.2

Structurei

3D structure databases

ProteinModelPortaliQ09461
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati34 – 153Solcar 1Add BLAST120
Repeati172 – 256Solcar 2Add BLAST85
Repeati266 – 355Solcar 3Add BLAST90

Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0761 Eukaryota
ENOG410XQVP LUCA
GeneTreeiENSGT00790000123051
HOGENOMiHOG000214473
InParanoidiQ09461
KOiK15119
OMAiKWLCEKS
OrthoDBiEOG091G07QQ
PhylomeDBiQ09461

Family and domain databases

Gene3Di1.50.40.10, 1 hit
InterProiView protein in InterPro
IPR018108 Mitochondrial_sb/sol_carrier
IPR023395 Mt_carrier_dom_sf
PfamiView protein in Pfam
PF00153 Mito_carr, 3 hits
SUPFAMiSSF103506 SSF103506, 2 hits
PROSITEiView protein in PROSITE
PS50920 SOLCAR, 3 hits

Sequencei

Sequence statusi: Complete.

Q09461-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSPCESGKT TNCSGAPSSS CAKSVECCKK QLSVGVLQQV SASSSGAIVT
60 70 80 90 100
SLFMTPLDVV KIRLQQQTRP FPKGECFYYH NGLMEHVCVS CEVRKPCEWY
110 120 130 140 150
QRPGNFRGTA DAIVKIARHE GIRSLWSGLS PTMVMALPAT VFYFTTYDNL
160 170 180 190 200
SVWLKKKMCC RRAFSPEKWT PPDWSAAAVA GIVARTIAVT VVSPIEMIRT
210 220 230 240 250
KMQSKRLTYH EIGHLVRSSM ATKGISSFYL GWTPTMLRDI PFSGIYWAGY
260 270 280 290 300
DLFKTNLQRR QGPDHNPFVV SFVSGAAAGV VASIFTHPFD VIKTNCQIRI
310 320 330 340 350
GGSIDDMNKS ITTVIKDMYH SRGISAFSSG LVPRLVKVSP SCAIMISFYE
360
YFKFLFQKNH
Length:360
Mass (Da):40,014
Last modified:March 1, 2004 - v2
Checksum:i0992D25AA57A0BF3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46787 Genomic DNA Translation: CAA86739.2
PIRiT19322
RefSeqiNP_497836.2, NM_065435.4
UniGeneiCel.34020

Genome annotation databases

EnsemblMetazoaiC16C10.1; C16C10.1; WBGene00007622
GeneIDi175537
KEGGicel:CELE_C16C10.1
UCSCiC16C10.1.2 c. elegans

Similar proteinsi

Entry informationi

Entry nameiYQ51_CAEEL
AccessioniPrimary (citable) accession number: Q09461
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: March 1, 2004
Last modified: May 23, 2018
This is version 118 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

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