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Protein

Uncharacterized protein F47D12.3

Gene

F47D12.3

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. protein homooligomerization Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein F47D12.3
Gene namesi
ORF Names:F47D12.3
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome III

Organism-specific databases

WormBaseiF47D12.3; CE01947; WBGene00018560.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 140140Uncharacterized protein F47D12.3PRO_0000065351Add
BLAST

Proteomic databases

PaxDbiQ09389.
PRIDEiQ09389.

Interactioni

Protein-protein interaction databases

IntActiQ09389. 2 interactions.

Structurei

3D structure databases

ProteinModelPortaliQ09389.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG243847.
HOGENOMiHOG000021117.
InParanoidiQ09389.
OMAiFNCEDAW.
OrthoDBiEOG76DTXT.
PhylomeDBiQ09389.

Family and domain databases

InterProiIPR011333. BTB/POZ_fold.
IPR003131. T1-type_BTB.
[Graphical view]
PfamiPF02214. BTB_2. 1 hit.
[Graphical view]
SUPFAMiSSF54695. SSF54695. 1 hit.

Sequencei

Sequence statusi: Complete.

Q09389-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVNELSFNCE DAWLNLFVGG EMYPVQVKTL MNPTTCGSYF RDVVKVSDAA
60 70 80 90 100
IKVRGVQWDT APNHIKFRVD IDRDGVLFRH VLQYLRNGKL TSLPDDIFTL
110 120 130 140
ESLVAEAEFF GLEKYREMLK KKLWKLTGKR QYYACYEDSD
Length:140
Mass (Da):16,301
Last modified:October 1, 1996 - v1
Checksum:iE4866BD5F2A6CA15
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080618 Genomic DNA. Translation: CCD83368.1.
PIRiA88479.
RefSeqiNP_498381.1. NM_065980.1.
UniGeneiCel.34526.

Genome annotation databases

EnsemblMetazoaiF47D12.3; F47D12.3; WBGene00018560.
GeneIDi185932.
KEGGicel:CELE_F47D12.3.
UCSCiF47D12.3. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080618 Genomic DNA. Translation: CCD83368.1.
PIRiA88479.
RefSeqiNP_498381.1. NM_065980.1.
UniGeneiCel.34526.

3D structure databases

ProteinModelPortaliQ09389.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ09389. 2 interactions.

Proteomic databases

PaxDbiQ09389.
PRIDEiQ09389.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF47D12.3; F47D12.3; WBGene00018560.
GeneIDi185932.
KEGGicel:CELE_F47D12.3.
UCSCiF47D12.3. c. elegans.

Organism-specific databases

CTDi185932.
WormBaseiF47D12.3; CE01947; WBGene00018560.

Phylogenomic databases

eggNOGiNOG243847.
HOGENOMiHOG000021117.
InParanoidiQ09389.
OMAiFNCEDAW.
OrthoDBiEOG76DTXT.
PhylomeDBiQ09389.

Miscellaneous databases

NextBioi930042.

Family and domain databases

InterProiIPR011333. BTB/POZ_fold.
IPR003131. T1-type_BTB.
[Graphical view]
PfamiPF02214. BTB_2. 1 hit.
[Graphical view]
SUPFAMiSSF54695. SSF54695. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiYR43_CAEEL
AccessioniPrimary (citable) accession number: Q09389
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: January 7, 2015
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.