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Q09389 (YR43_CAEEL) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein F47D12.3
Gene names
ORF Names:F47D12.3
OrganismCaenorhabditis elegans [Reference proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length140 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processprotein homooligomerization

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 140140Uncharacterized protein F47D12.3
PRO_0000065351

Sequences

Sequence LengthMass (Da)Tools
Q09389 [UniParc].

Last modified October 1, 1996. Version 1.
Checksum: E4866BD5F2A6CA15

FASTA14016,301
        10         20         30         40         50         60 
MVNELSFNCE DAWLNLFVGG EMYPVQVKTL MNPTTCGSYF RDVVKVSDAA IKVRGVQWDT 

        70         80         90        100        110        120 
APNHIKFRVD IDRDGVLFRH VLQYLRNGKL TSLPDDIFTL ESLVAEAEFF GLEKYREMLK 

       130        140 
KKLWKLTGKR QYYACYEDSD 

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO080618 Genomic DNA. Translation: CCD83368.1.
PIRA88479.
RefSeqNP_498381.1. NM_065980.1.
UniGeneCel.34526.

3D structure databases

ProteinModelPortalQ09389.
SMRQ09389. Positions 12-125.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ09389. 2 interactions.

Proteomic databases

PaxDbQ09389.
PRIDEQ09389.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaF47D12.3; F47D12.3; F47D12.3.
GeneID185932.
KEGGcel:CELE_F47D12.3.
UCSCF47D12.3. c. elegans.

Organism-specific databases

CTD185932.
WormBaseF47D12.3; CE01947; WBGene00018560.

Phylogenomic databases

eggNOGNOG243847.
HOGENOMHOG000021117.
InParanoidQ09389.
OMAFNCEDAW.
OrthoDBEOG76DTXT.
PhylomeDBQ09389.

Family and domain databases

Gene3D3.30.710.10. 1 hit.
InterProIPR011333. BTB/POZ_fold.
IPR003131. T1-type_BTB.
[Graphical view]
PfamPF02214. BTB_2. 1 hit.
[Graphical view]
SUPFAMSSF54695. SSF54695. 1 hit.
ProtoNetSearch...

Other

NextBio930042.

Entry information

Entry nameYR43_CAEEL
AccessionPrimary (citable) accession number: Q09389
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: April 16, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Relevant documents

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormBase