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Protein

Xylose isomerase

Gene

xylA

Organism
Stigmatella aurantiaca (strain DW4/3-1)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationNote: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei102UniRule annotation1
Active sitei105UniRule annotation1
Metal bindingi233Magnesium 1UniRule annotation1
Metal bindingi269Magnesium 1UniRule annotation1
Metal bindingi269Magnesium 2UniRule annotation1
Metal bindingi272Magnesium 2UniRule annotation1
Metal bindingi297Magnesium 1UniRule annotation1
Metal bindingi308Magnesium 2UniRule annotation1
Metal bindingi310Magnesium 2UniRule annotation1
Metal bindingi340Magnesium 1UniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotationImported
Biological processCarbohydrate metabolism, Xylose metabolismUniRule annotationSAAS annotation
LigandMagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciSAUR378806:G1GOG-2387-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotationSAAS annotation (EC:5.3.1.5UniRule annotationSAAS annotation)
Gene namesi
Name:xylAUniRule annotationImported
Ordered Locus Names:STAUR_2372Imported
ORF Names:STIAU_1199Imported
OrganismiStigmatella aurantiaca (strain DW4/3-1)Imported
Taxonomic identifieri378806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeArchangiaceaeStigmatella
Proteomesi
  • UP000032702 Componenti: Unassembled WGS sequence
  • UP000001351 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi378806.STAUR_2372

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105C93 Bacteria
COG2115 LUCA
KOiK01805
OMAiHTFQHEL
OrthoDBiPOG091H07LC

Family and domain databases

HAMAPiMF_00455 Xylose_isom_A, 1 hit
InterProiView protein in InterPro
IPR036237 Xyl_isomerase-like_sf
IPR013452 Xylose_isom_bac
IPR001998 Xylose_isomerase
PANTHERiPTHR32176:SF0 PTHR32176:SF0, 1 hit
PRINTSiPR00688 XYLOSISMRASE
SUPFAMiSSF51658 SSF51658, 1 hit
TIGRFAMsiTIGR02630 xylose_isom_A, 1 hit
PROSITEiView protein in PROSITE
PS51415 XYLOSE_ISOMERASE, 1 hit

Sequencei

Sequence statusi: Complete.

Q08YE2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MREPFFADIA PVRYEGLKST HPLAYRWYEP NRLVLGRSMA EHLRLAVCYW
60 70 80 90 100
HTFCWAGSDP FGPATMPRPW MQPGDAMALA EQKLSVAFEL FEKLGVPFFT
110 120 130 140 150
FHDRDLAPEL GSLRASQHAL KVMLDKAQVM MERTGVKLLW GTANLFSHPR
160 170 180 190 200
YMAGAATNPD PEVFAHAAAQ VRDALEATHR LGGANYVLWG GREGYDTLLN
210 220 230 240 250
THLKREIDQL GRFLNLVVEH KHKLGFKGTI LIEPKPMEPT KHQYDYDVST
260 270 280 290 300
VYGFLERSGL AKEVKVNIEV NHATLAGHTF DHEVATAIAL GIFGSIDMNR
310 320 330 340 350
GDPQNGWDTD QFPNNAPELV LPLYRILQAG GFTTGGINFD AKVRRQSIEP
360 370 380 390 400
VDLLHAHVGA IDVLARALLA AAAMLEEGAL SRHIDQRYAG WEGELGRKIT
410 420 430
EGQIDLAGLA NLAVDADLAP KPRSGRQEML ENLVNRYI
Length:438
Mass (Da):48,793
Last modified:October 31, 2006 - v1
Checksum:iD79D3CE090618302
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002271 Genomic DNA Translation: ADO70176.1
AAMD01000080 Genomic DNA Translation: EAU65496.1
RefSeqiWP_002615196.1, NZ_AAMD01000080.1

Genome annotation databases

EnsemblBacteriaiADO70176; ADO70176; STAUR_2372
EAU65496; EAU65496; STIAU_1199
KEGGisur:STAUR_2372
PATRICifig|378806.16.peg.4541

Similar proteinsi

Entry informationi

Entry nameiQ08YE2_STIAD
AccessioniPrimary (citable) accession number: Q08YE2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: May 23, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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