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Q08SZ6

- Q08SZ6_STIAD

UniProt

Q08SZ6 - Q08SZ6_STIAD

Protein

Elongation factor Tu

Gene

tuf

Organism
Stigmatella aurantiaca (strain DW4/3-1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (31 Oct 2006)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi19 – 268GTPUniRule annotation
    Nucleotide bindingi81 – 855GTPUniRule annotation
    Nucleotide bindingi136 – 1394GTPUniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-HAMAP
    3. translation elongation factor activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Elongation factorUniRule annotationImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciSAUR378806:GCZI-3736-MONOMER.
    SAUR378806:GCZI-5022-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tufUniRule annotationImported
    Ordered Locus Names:STAUR_3736Imported, STAUR_5022Imported
    ORF Names:STIAU_3482Imported, STIAU_5141Imported
    OrganismiStigmatella aurantiaca (strain DW4/3-1)Imported
    Taxonomic identifieri378806 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeCystobacteraceaeStigmatella
    ProteomesiUP000001351: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliQ08SZ6.
    SMRiQ08SZ6. Positions 2-396.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily.UniRule annotation
    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    KOiK02358.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q08SZ6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKEKFERNK PHVNIGTIGH VDHGKTSLTA AITKVLAKTG GATFLAYDQI    50
    DKAPEERERG ITISTAHVEY QTKNRHYAHV DCPGHADYVK NMITGAAQMD 100
    GAILVVSAAD GPMPQTREHI LLARQVGVPY IVVFLNKVDM LDDPELRELV 150
    EMEVRDLLKK YEFPGDSIPI IPGSALKALE GDTSDIGEGA ILKLMAAVDE 200
    YIPTPQRATD KPFLMPVEDV FSIAGRGTVA TGRVERGKIK VGEEVEIVGI 250
    RPTQKTVITG VEMFRKLLDE GMAGDNIGAL LRGLKREDLE RGQVLAKPGS 300
    INPHTKFKAQ VYVLSKEEGG RHTPFFKGYR PQFYFRTTDV TGTVKLPDNV 350
    EMVMPGDNIA IEVELITPVA MEKELRFAIR EGGRTVGAGV VADIIA 396
    Length:396
    Mass (Da):43,351
    Last modified:October 31, 2006 - v1
    Checksum:i85EA85F4BDEF5545
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002271 Genomic DNA. Translation: ADO71524.1.
    CP002271 Genomic DNA. Translation: ADO72799.1.
    AAMD01000155 Genomic DNA. Translation: EAU63606.1.
    AAMD01000069 Genomic DNA. Translation: EAU65867.1.
    RefSeqiWP_002614750.1. NZ_AAMD01000155.1.
    YP_003953351.1. NC_014623.1.
    YP_003954626.1. NC_014623.1.

    Genome annotation databases

    EnsemblBacteriaiADO71524; ADO71524; STAUR_3736.
    ADO72799; ADO72799; STAUR_5022.
    EAU63606; EAU63606; STIAU_3482.
    EAU65867; EAU65867; STIAU_5141.
    GeneIDi9877229.
    9878515.
    KEGGisur:STAUR_3736.
    sur:STAUR_5022.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002271 Genomic DNA. Translation: ADO71524.1 .
    CP002271 Genomic DNA. Translation: ADO72799.1 .
    AAMD01000155 Genomic DNA. Translation: EAU63606.1 .
    AAMD01000069 Genomic DNA. Translation: EAU65867.1 .
    RefSeqi WP_002614750.1. NZ_AAMD01000155.1.
    YP_003953351.1. NC_014623.1.
    YP_003954626.1. NC_014623.1.

    3D structure databases

    ProteinModelPortali Q08SZ6.
    SMRi Q08SZ6. Positions 2-396.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO71524 ; ADO71524 ; STAUR_3736 .
    ADO72799 ; ADO72799 ; STAUR_5022 .
    EAU63606 ; EAU63606 ; STIAU_3482 .
    EAU65867 ; EAU65867 ; STIAU_5141 .
    GeneIDi 9877229.
    9878515.
    KEGGi sur:STAUR_3736.
    sur:STAUR_5022.

    Phylogenomic databases

    KOi K02358.

    Enzyme and pathway databases

    BioCyci SAUR378806:GCZI-3736-MONOMER.
    SAUR378806:GCZI-5022-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Nierman W.C.
      Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DW4/3-1Imported.
    2. "Evolution of fruiting body formation in Myxococcales: a comparative genomic analysis."
      Huntley S., Hamann N., Wegener-Feldbruegge S., Treuner-Lange A., Kube M., Reinhardt R., Klages S., Mueller R., Ronning C.M., Nierman W.C., Sogaard-Andersen L.
      Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DW4/3-1Imported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DW4/3-1Imported.

    Entry informationi

    Entry nameiQ08SZ6_STIAD
    AccessioniPrimary (citable) accession number: Q08SZ6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 31, 2006
    Last sequence update: October 31, 2006
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3