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Q08QW9 (Q08QW9_STIAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase beta subunit HAMAP-Rule MF_00255
EC=6.1.1.14 HAMAP-Rule MF_00255
Alternative name(s):
Glycyl-tRNA synthetase beta subunit HAMAP-Rule MF_00255
Gene names
Name:glyS HAMAP-Rule MF_00255 EMBL EAU62875.1
Ordered Locus Names:STAUR_4985 EMBL ADO72763.1
ORF Names:STIAU_1147 EMBL EAU62875.1
OrganismStigmatella aurantiaca (strain DW4/3-1) [Complete proteome] [HAMAP] EMBL EAU62875.1
Taxonomic identifier378806 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Myxococcales › Cystobacterineae › Cystobacteraceae › Stigmatella ›

Protein attributes

Sequence length703 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). SAAS SAAS015944 HAMAP-Rule MF_00255

Subunit structure

Tetramer of two alpha and two beta subunits By similarity. SAAS SAAS015944 HAMAP-Rule MF_00255

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00255.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00255

Sequences

Sequence LengthMass (Da)Tools
Q08QW9 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 013679C7C6950743

FASTA70376,953
        10         20         30         40         50         60 
MARDLLLEVG AEEIPASFIG PALEDLQRII TTRLAEGRLK HGEVRTYGTP RRLAVWVKDV 

        70         80         90        100        110        120 
ADAGEDVTSE KLGPSAKAAF DKEGKPTVAA TKFAESLKIP VSELGRTQTP KGEYLSARVQ 

       130        140        150        160        170        180 
EKGRPAAELL PEVLHAAVHG INFRKSMRWG DVDLAFARPV QWIVALLGGD VLPVVFGDVK 

       190        200        210        220        230        240 
SGRTTHGHRF LSPGAIELAR PADYEAVLEK AHVVPDIAKR RAMLLQKVRA VAQGTGGQLL 

       250        260        270        280        290        300 
EDEALVDQVT NLVELPSPVV GTFDARHLDL PSEVLVQEMK SHQRYFSLTD AQGKLLPKFI 

       310        320        330        340        350        360 
AVSNTPVKDE TLSLRGYERV LRSRLADGRF FFDEDRKAPL EGRVEKLSRV VWQGQLGSYA 

       370        380        390        400        410        420 
EKVERFRTLA VWLAEQTGKN EHSTTIQRAA TLAKADLVTG MVGEFPELQG VMGREYARAG 

       430        440        450        460        470        480 
GEPEAVALAI FEHYLPRNAN DALPSQDPGA LIGLADRLDS LCGIFAIGKA PTGAADPFGL 

       490        500        510        520        530        540 
RRACLAIINI VFGRGYRFSL SAAVGEALRL LSPKIANVKR KAGEPEPREQ ILEFFRGRLK 

       550        560        570        580        590        600 
ALWSENYRTD VVEAVLAVGF DDLVAARKRL EALSGIVGRA DFTPLAVAFK RVVNIVEKQG 

       610        620        630        640        650        660 
KDVARGQTNP DKLRDEPEKN LHSAFTQARG KVAQYVQADD FSSALKEITG LKPAVDTFFD 

       670        680        690        700 
KVTVMAEDPE LRENRVRFLT EIGALFNQVA DFSKIQAEAA QGG

« Hide

References

« Hide 'large scale' references
[1]Nierman W.C.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DW4/3-1 EMBL EAU62875.1.
[2]"Evolution of fruiting body formation in Myxococcales: a comparative genomic analysis."
Huntley S., Hamann N., Wegener-Feldbruegge S., Treuner-Lange A., Kube M., Reinhardt R., Klages S., Mueller R., Ronning C.M., Nierman W.C., Sogaard-Andersen L.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DW4/3-1.
[3]"Comparative genomic analysis of fruiting body formation in Myxococcales."
Huntley S., Hamann N., Wegener-Feldbrugge S., Treuner-Lange A., Kube M., Reinhardt R., Klages S., Muller R., Ronning C.M., Nierman W.C., Sogaard-Andersen L.
Mol. Biol. Evol. 28:1083-1097(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DW4/3-1 EMBL ADO72763.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002271 Genomic DNA. Translation: ADO72763.1.
AAMD01000198 Genomic DNA. Translation: EAU62875.1.
RefSeqYP_003954590.1. NC_014623.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO72763; ADO72763; STAUR_4985.
EAU62875; EAU62875; STIAU_1147.
GeneID9878478.
KEGGsur:STAUR_4985.
PATRIC38562343. VBIStiAur43712_7145.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01879.

Enzyme and pathway databases

BioCycSAUR378806:GCZI-4985-MONOMER.

Family and domain databases

HAMAPMF_00255. Gly_tRNA_synth_beta.
InterProIPR008909. DALR_anticod-bd.
IPR015944. Gly-tRNA-synth_bsu.
IPR006194. Gly-tRNA-synth_heterodimer.
[Graphical view]
PfamPF05746. DALR_1. 1 hit.
PF02092. tRNA_synt_2f. 1 hit.
[Graphical view]
PRINTSPR01045. TRNASYNTHGB.
TIGRFAMsTIGR00211. glyS. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ08QW9_STIAD
AccessionPrimary (citable) accession number: Q08QW9
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: May 29, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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