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Q08QR9 (Q08QR9_STIAD) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

D-ala D-ala ligase family EMBL ADO71567.1
Gene names
Ordered Locus Names:STAUR_3779 EMBL ADO71567.1
ORF Names:STIAU_5187 EMBL EAU62830.1
OrganismStigmatella aurantiaca (strain DW4/3-1) [Complete proteome] [HAMAP] EMBL EAU62830.1
Taxonomic identifier378806 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeCystobacteraceaeStigmatella

Protein attributes

Sequence length344 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL EAU62830.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpeptidoglycan biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

D-alanine-D-alanine ligase activity

Inferred from electronic annotation. Source: InterPro

metal ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q08QR9 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 7C0E364D423B2DAD

FASTA34438,184
        10         20         30         40         50         60 
MPLPPSKIAI LHYQLDGDPV DPVVLQVGES LRKLGHQPSF IAVSDRVFDI LQEIERSGCD 

        70         80         90        100        110        120 
LVFNLCETFA EDYRLEVNVA ALMEMARVKF TGSGTAGLLL AQDKILTKQL LEYHEIPTPD 

       130        140        150        160        170        180 
FATFDGSTVE TNGDLAFPLI VKPARSDASI GIGGKSLVNS WEQLTDRVRE IRKELRDEAL 

       190        200        210        220        230        240 
AEEFIQGREV YVGIIGTKEL PEILPIVELD FGNWDKDKPT ISDREVKFGP ETEGSPKLVI 

       250        260        270        280        290        300 
ARDISPVLRQ RVERAALLAY RALKLQDYAR IDLRISEQDD PYILEVNPNP YLEDKGELAL 

       310        320        330        340 
AAREKGLSYT QLIGRILDSA GHRYGLMKKP APTAQDSATA PAMG 

« Hide

References

« Hide 'large scale' references
[1]Nierman W.C.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DW4/3-1 EMBL EAU62830.1.
[2]"Evolution of fruiting body formation in Myxococcales: a comparative genomic analysis."
Huntley S., Hamann N., Wegener-Feldbruegge S., Treuner-Lange A., Kube M., Reinhardt R., Klages S., Mueller R., Ronning C.M., Nierman W.C., Sogaard-Andersen L.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DW4/3-1.
[3]"Comparative genomic analysis of fruiting body formation in Myxococcales."
Huntley S., Hamann N., Wegener-Feldbrugge S., Treuner-Lange A., Kube M., Reinhardt R., Klages S., Muller R., Ronning C.M., Nierman W.C., Sogaard-Andersen L.
Mol. Biol. Evol. 28:1083-1097(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DW4/3-1 EMBL ADO71567.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002271 Genomic DNA. Translation: ADO71567.1.
AAMD01000202 Genomic DNA. Translation: EAU62830.1.
RefSeqYP_003953394.1. NC_014623.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO71567; ADO71567; STAUR_3779.
EAU62830; EAU62830; STIAU_5187.
GeneID9877272.
KEGGsur:STAUR_3779.
PATRIC38562449. VBIStiAur43712_7196.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01921.

Enzyme and pathway databases

BioCycSAUR378806:GCZI-3779-MONOMER.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ08QR9_STIAD
AccessionPrimary (citable) accession number: Q08QR9
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: February 19, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)