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Protein

RUN domain-containing protein 3B

Gene

RUNDC3B

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
RUN domain-containing protein 3B
Gene namesi
Name:RUNDC3B
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 4

Organism-specific databases

VGNCiVGNC:34219 RUNDC3B

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003360481 – 423RUN domain-containing protein 3BAdd BLAST423

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei13Omega-N-methylarginineBy similarity1
Modified residuei231PhosphoserineBy similarity1
Modified residuei232PhosphoserineBy similarity1

Keywords - PTMi

Methylation, Phosphoprotein

Proteomic databases

PaxDbiQ08E29
PRIDEiQ08E29

Expressioni

Gene expression databases

BgeeiENSBTAG00000021313

Interactioni

Subunit structurei

Interacts with RAP2A.By similarity

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000052812

Structurei

3D structure databases

ProteinModelPortaliQ08E29
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini56 – 205RUNPROSITE-ProRule annotationAdd BLAST150

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili293 – 341Sequence analysisAdd BLAST49

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi14 – 18Poly-Gly5

Sequence similaritiesi

Belongs to the RUNDC3 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG4381 Eukaryota
ENOG410XRAX LUCA
GeneTreeiENSGT00550000074558
HOGENOMiHOG000143407
HOVERGENiHBG052747
InParanoidiQ08E29
OMAiTHLTNQW
OrthoDBiEOG091G06Y5
TreeFamiTF323904

Family and domain databases

InterProiView protein in InterPro
IPR004012 Run_dom
IPR037213 Run_dom_sf
PfamiView protein in Pfam
PF02759 RUN, 1 hit
SMARTiView protein in SMART
SM00593 RUN, 1 hit
SUPFAMiSSF140741 SSF140741, 1 hit
PROSITEiView protein in PROSITE
PS50826 RUN, 1 hit

Sequencei

Sequence statusi: Complete.

Q08E29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASRSLGGLG GSRGGGGGVK KSLSARNAAV ERRNLITVCR FSVKTLIDRS
60 70 80 90 100
CFETIDDSSP EFNNFAAILE QILSHRLKES SQSCRWLSHL QIPLQGQVTW
110 120 130 140 150
FGYGSPRSFW DYIRVACRKV SQNCICSIEN MEHVSSSRAK GRAWIRVALM
160 170 180 190 200
EKHLSEYIST ALRDFKTTRR FYEDGAIVLG EEANMLAGML LGLNAIDFSF
210 220 230 240 250
CLKGERLDGN LPAVIDYIPY LRFTQSSDSI SSDEEELRTL GSSDSESSTP
260 270 280 290 300
EKAGPPVIMD ENSWFNKCKR VKQKYQLTLE QKGYLEELLQ LRENQLSESV
310 320 330 340 350
AQNKILLQRI EDSDLAHKLE KEQLEYIIVE LQDQLKSYQS LDQLSAEVSL
360 370 380 390 400
SQTSLDPGQS QEGDGKQDTL NLISEGKEDT PSLLGLCGSL TSVASYKSLT
410 420
SLKSNDYLAS PTTEMTSPGL TPS
Length:423
Mass (Da):47,034
Last modified:October 31, 2006 - v1
Checksum:iEB090F7636698512
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC123450 mRNA Translation: AAI23451.1
RefSeqiNP_001070342.1, NM_001076874.1
UniGeneiBt.40982

Genome annotation databases

EnsembliENSBTAT00000055755; ENSBTAP00000052812; ENSBTAG00000021313
GeneIDi525116
KEGGibta:525116

Similar proteinsi

Entry informationi

Entry nameiRUN3B_BOVIN
AccessioniPrimary (citable) accession number: Q08E29
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: October 31, 2006
Last modified: March 28, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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