Q08E14 (Q08E14_BOVIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Collagen, type III, alpha 1 EMBL AAI23470.1

Gene names

Name:

COL3A1 EMBL AAI23470.1

Organism

Bos taurus (Bovine) EMBL AAI23470.1

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	1466 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Domain	Collagen EMBL AAI23470.1
Gene Ontology (GO)
Cellular_component	collagen Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	extracellular matrix structural constituent Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q08E14 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 01E27D6281E4FE20	FASTA	1,466	138,439
	10 20 30 40 50 60 MMSFVQKGTW LLFALLHPTV ILAQQEAVDG GCSHLGQSYA DRDVWKPEPC QICVCDSGSV 70 80 90 100 110 120 LCDDIICDDQ ELDCPNPEIP FGECCAVCPQ PPTAPTRPPN GQGPQGPKGD PGPPGIPGRN 130 140 150 160 170 180 GDPGPPGSPG SPGSPGPPGI CESCPTGGQN YSPQYEAYDV KSGVAGGGIA GYPGPAGPPG 190 200 210 220 230 240 PPGPPGTSGH PGAPGAPGYQ GPPGEPGQAG PAGPPGPPGA IGPSGPAGKD GESGRPGRPG 250 260 270 280 290 300 ERGFPGPPGM KGPAGMPGFP GMKGHRGFDG RNGEKGETGA PGLKGENGVP GENGAPGPMG 310 320 330 340 350 360 PRGAPGERGR PGLPGAAGAR GNDGARGSDG QPGPPGPPGT AGFPGSPGAK GEVGPAGSPG 370 380 390 400 410 420 SSGAPGQRGE PGPQGHAGAP GPPGPPGSNG SPGGKGEMGP AGIPGAPGLI GARGPPGPPG 430 440 450 460 470 480 TNGVPGQRGA AGEPGKNGAK GDPGPRGERG EAGSPGIAGP KGEDGKDGSP GEPGANGLPG 490 500 510 520 530 540 AAGERGVPGF RGPAGANGLP GEKGPPGDRG GPGPAGPRGV AGEPGRDGLP GGPGLRGIPG 550 560 570 580 590 600 SPGGPGSDGK PGPPGSQGET GRPGPPGSPG PRGQPGVMGF PGPKGNDGAP GKNGERGGPG 610 620 630 640 650 660 GPGPQGPAGK NGETGPQGPP GPTGPSGDKG DTGPPGPQGL QGLPGTSGPP GENGKPGEPG 670 680 690 700 710 720 PKGEAGAPGI PGGKGDSGAP GERGPPGAGG PPGPRGGAGP PGPEGGKGAA GPPGPPGSAG 730 740 750 760 770 780 TPGLQGMPGE RGGPGGPGPK GDKGEPGSSG VDGAPGKDGP RGPTGPIGPP GPAGQPGDKG 790 800 810 820 830 840 ESGAPGVPGI AGPRGGPGER GEQGPPGPAG FPGAPGQNGE PGAKGERGAP GEKGEGGPPG 850 860 870 880 890 900 AAGPAGGSGP AGPPGPQGVK GERGSPGGPG AAGFPGGRGP PGPPGSNGNP GPPGSSGAPG 910 920 930 940 950 960 KDGPPGPPGS NGAPGSPGIS GPKGDSGPPG ERGAPGPQGP PGAPGPLGIA GLTGARGLAG 970 980 990 1000 1010 1020 PPGMPGARGS PGPQGIKGEN GKPGPSGQNG ERGPPGPQGL PGLAGTAGEP GRDGNPGSDG 1030 1040 1050 1060 1070 1080 LPGRDGAPGA KGDRGENGSP GAPGAPGHPG PPGPVGPAGK SGDRGETGPA GPSGAPGPAG 1090 1100 1110 1120 1130 1140 SRGPPGPQGP RGDKGETGER GAMGIKGHRG FPGNPGAPGS PGPAGHQGAV GSPGPAGPRG 1150 1160 1170 1180 1190 1200 PVGPSGPPGK DGASGHPGPI GPPGPRGNRG ERGSEGSPGH PGQPGPPGPP GAPGPCCGAG 1210 1220 1230 1240 1250 1260 GVAAIAGVGA EKAGGFAPYY GDEPIDFKIN TDEIMTSLKS VNGQIESLIS PDGSRKNPAR 1270 1280 1290 1300 1310 1320 NCRDLKFCHP ELQSGEYWVD PNQGCKLDAI KVYCNMETGE TCISASPLTI PQKNWWTDSG 1330 1340 1350 1360 1370 1380 AEKKHVWFGE SMEGGFQFSY GNPELPEDVL DVQLAFLRLL SSRASQNITY HCKNSIAYMD 1390 1400 1410 1420 1430 1440 HASGNVKKAL KLMGSNEGEF KAEGNSKFTY TVLEDGCTKH TGEWGKTVFQ YQTRKAVRLP 1450 1460 IVDIAPYDIG GPDQEFGADI GPVCFL

References

[1]

Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J. , Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., Holt R., Jones S.J., Marra M.A. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: L1 Hereford EMBL AAI23470.1. Tissue: Fetal skin EMBL AAI23470.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC123469 mRNA. Translation: AAI23470.1.
IPI	IPI00731432.
RefSeq	NP_001070299.1. NM_001076831.1.
UniGene	Bt.64714.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	510833.
KEGG	bta:510833.
Organism-specific databases
CTD	1281.
Phylogenomic databases
HOGENOM	HOG000085654.
HOVERGEN	HBG004933.
InParanoid	Q08E14.
KO	K06236.
OrthoDB	EOG4FTW1C.
Family and domain databases
InterPro	IPR008160. Collagen. IPR000885. Fib_collagen_C. IPR001007. VWF_C. [Graphical view]
Pfam	PF01410. COLFI. 1 hit. PF01391. Collagen. 4 hits. PF00093. VWC. 1 hit. [Graphical view]
ProDom	PD002078. Fib_collagen_C. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00038. COLFI. 1 hit. SM00214. VWC. 1 hit. [Graphical view]
PROSITE	PS51461. NC1_FIB. 1 hit. PS01208. VWFC_1. 1 hit. PS50184. VWFC_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20869641.

Entry information

Entry name

Q08E14_BOVIN

Accession

Primary (citable) accession number: Q08E14

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	April 3, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)