Q08DM9 (Q08DM9_BOVIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13) EMBL AAI23663.1

Submitted name:
Uncharacterized protein Ensembl ENSBTAP00000049644

Gene names

Name:

GALNT13 EMBL AAI23663.1 Ensembl ENSBTAP00000049644

Organism

Bos taurus (Bovine) EMBL AAI23663.1

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	556 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Cofactor	Calcium By similarity. SAAS SAAS001173 Manganese By similarity. SAAS SAAS001173
Pathway	Protein modification; protein glycosylation. SAAS SAAS001173
Sequence similarities	Contains 1 ricin B-type lectin domain. SAAS SAAS001173

Ontologies

Keywords
Cellular component	Golgi apparatus SAAS SAAS001173 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS001173
Ligand	Calcium SAAS SAAS001173 Lectin SAAS SAAS001173 Manganese SAAS SAAS001173
Molecular function	Glycosyltransferase SAAS SAAS000772 RuleBase RU003687 Transferase
PTM	Disulfide bond SAAS SAAS001173
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	sugar binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q08DM9 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 8AFC23FC9CAD4DCB	FASTA	556	64,063
	10 20 30 40 50 60 MRRFVYCKVV LATSLMWVLV DVFLLLYFSE CNKCDDKKER SLLPALRAVI SRNQEGPGEM 70 80 90 100 110 120 GKAVLIPKDD QEKMKELFKI NQFNLMASDL IALNRSLPDV RLEGCKTRVY PDELPNTSVV 130 140 150 160 170 180 IVFHNEAWST LLRTVYSVIN RSPHYLLSEV ILVDDASERD FLKLTLENYV KNLEVPVKII 190 200 210 220 230 240 RMEERSGLIR ARLRGAAASK GQVITFLDAH CECTLGWLEP LLARIKEDRK TVVCPIIDVI 250 260 270 280 290 300 SDDTFEYMAG SDMTYGGFNW KLNFRWYPVP QREMDRRKGD RTLPVRTPTM AGGLFSIDRN 310 320 330 340 350 360 YFEEIGTYDA GMDIWGGENL EMSFRIWQCG GSLEIVTCSH VGHVFRKATP YTFPGGTGHV 370 380 390 400 410 420 INKNNRRLAE VWMDEFKDFF YIISPGVVKV DYGDVSVRKT LRENLKCKPF SWYLENIYPD 430 440 450 460 470 480 SQIPRRYYSL GEIRNVETNQ CLDNMGRKEN EKVGIFNCHG MGGNQVFSYT ADKEIRTDDL 490 500 510 520 530 540 CLDVSRLNGP VIMLKCHHMR GNQLWEYDAE RLTLRHVNSN QCLDEPSEED KMVPTMQDCS 550 GTRSQQWLLR NMTLGA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome sequence of taurine cattle: a window to ruminant biology and evolution." The bovine genome sequencing and analysis consortium Science 324:522-528(2009) [PubMed: 19390049] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Hereford Ensembl ENSBTAP00000049644.
[2]	Ensembl Submitted (NOV-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Hereford.
[3]	Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J. , Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., Holt R., Jones S.J., Marra M.A. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: L1 Hereford EMBL AAI23663.1. Tissue: Cerebral cortex EMBL AAI23663.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DAAA02004546 Genomic DNA. No translation available. DAAA02004547 Genomic DNA. No translation available. DAAA02004548 Genomic DNA. No translation available. DAAA02004549 Genomic DNA. No translation available. DAAA02004550 Genomic DNA. No translation available. DAAA02004551 Genomic DNA. No translation available. DAAA02004552 Genomic DNA. No translation available. DAAA02004553 Genomic DNA. No translation available. DAAA02004554 Genomic DNA. No translation available. DAAA02004555 Genomic DNA. No translation available. DAAA02004556 Genomic DNA. No translation available. DAAA02004557 Genomic DNA. No translation available. DAAA02004558 Genomic DNA. No translation available. BC123662 mRNA. Translation: AAI23663.1.
IPI	IPI00717804.
RefSeq	NP_001070354.1. NM_001076886.1.
UniGene	Bt.47923.
3D structure databases
ProteinModelPortal	Q08DM9.
SMR	Q08DM9. Positions 94-552.
ModBase	Search...
Protein-protein interaction databases
STRING	Q08DM9.
Protein family/group databases
CAZy	CBM13. Carbohydrate-Binding Module Family 13. GT27. Glycosyltransferase Family 27.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSBTAT00000057469; ENSBTAP00000049644; ENSBTAG00000005562.
GeneID	532545.
KEGG	bta:532545.
Organism-specific databases
CTD	114805.
Phylogenomic databases
eggNOG	maNOG04880.
GeneTree	ENSGT00600000084102.
HOVERGEN	HBG051699.
InParanoid	Q08DM9.
OrthoDB	EOG40P46C.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
KO	K00710.
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
SUPFAM	SSF50370. RicinB_like. 1 hit.
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q08DM9_BOVIN

Accession

Primary (citable) accession number: Q08DM9

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)