Unreviewed, UniProtKB/TrEMBL Q08DM9 (Q08DM9_BOVIN)

Names and origin

Protein names

Submitted name:
    UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13) EMBL AAI23663.1

Gene names

Name:

GALNT13 EMBL AAI23663.1

Organism

Bos taurus (Bovine) EMBL AAI23663.1

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	556 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Pathway	Protein modification; protein glycosylation. Spearmint SPM000772
Sequence similarities	Contains 1 ricin B-type lectin domain. Spearmint SPM000772

Ontologies

Keywords
Cellular component	Golgi apparatus Spearmint SPM000772 Membrane
Domain	Transmembrane Spearmint SPM000772
Ligand	Calcium Spearmint SPM000772 Lectin Spearmint SPM000772 Manganese Spearmint SPM000772
Molecular function	Glycosyltransferase Spearmint SPM000772 RuleBase RU003687V0 Transferase
Gene Ontology (GO)
Biological process	protein amino acid O-linked glycosylation Inferred from electronic annotation. Source: Compara
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW manganese ion binding Inferred from electronic annotation. Source: UniProtKB-KW polypeptide N-acetylgalactosaminyltransferase activity Inferred from electronic annotation. Source: Compara sugar binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q08DM9-1 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 8AFC23FC9CAD4DCB	FASTA	556	64,063
	10 20 30 40 50 60 MRRFVYCKVV LATSLMWVLV DVFLLLYFSE CNKCDDKKER SLLPALRAVI SRNQEGPGEM 70 80 90 100 110 120 GKAVLIPKDD QEKMKELFKI NQFNLMASDL IALNRSLPDV RLEGCKTRVY PDELPNTSVV 130 140 150 160 170 180 IVFHNEAWST LLRTVYSVIN RSPHYLLSEV ILVDDASERD FLKLTLENYV KNLEVPVKII 190 200 210 220 230 240 RMEERSGLIR ARLRGAAASK GQVITFLDAH CECTLGWLEP LLARIKEDRK TVVCPIIDVI 250 260 270 280 290 300 SDDTFEYMAG SDMTYGGFNW KLNFRWYPVP QREMDRRKGD RTLPVRTPTM AGGLFSIDRN 310 320 330 340 350 360 YFEEIGTYDA GMDIWGGENL EMSFRIWQCG GSLEIVTCSH VGHVFRKATP YTFPGGTGHV 370 380 390 400 410 420 INKNNRRLAE VWMDEFKDFF YIISPGVVKV DYGDVSVRKT LRENLKCKPF SWYLENIYPD 430 440 450 460 470 480 SQIPRRYYSL GEIRNVETNQ CLDNMGRKEN EKVGIFNCHG MGGNQVFSYT ADKEIRTDDL 490 500 510 520 530 540 CLDVSRLNGP VIMLKCHHMR GNQLWEYDAE RLTLRHVNSN QCLDEPSEED KMVPTMQDCS 550 GTRSQQWLLR NMTLGA

References

[1]

Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J. , Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., Holt R., Jones S.J., Marra M.A. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: L1 Hereford EMBL AAI23663.1. Tissue: Cerebral cortex EMBL AAI23663.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BC123662 mRNA. Translation: AAI23663.1.
IPI	IPI00717804.
RefSeq	NP_001070354.1.
UniGene	Bt.47923
3D structure databases
SMR	Q08DM9. Positions 94-552.
ModBase	Search...
Protein family/group databases
CAZy	CBM13. Carbohydrate-Binding Module Family 13. GT27. Glycosyltransferase Family 27.
Genome annotation databases
Ensembl	ENSBTAT00000007312; ENSBTAP00000007312; ENSBTAG00000005562; Bos taurus. [Genome view] ENSBTAT00000057469; ENSBTAP00000049644; ENSBTAG00000005562; Bos taurus. [Genome view]
GeneID	532545.
KEGG	bta:532545.
Organism-specific databases
CTD	532545.
Phylogenomic databases
HOVERGEN	Q08DM9.
OMA	YFEEIGS.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q08DM9_BOVIN

Accession

Primary (citable) accession number: Q08DM9

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	November 3, 2009
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)