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Protein
Submitted name:

Uncharacterized protein

Gene

alg10

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Protein family/group databases

CAZyiGT59. Glycosyltransferase Family 59.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:alg10Imported
Synonyms:LOC548946Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-976267. alg10.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2419HelicalSequence analysisAdd
BLAST
Transmembranei65 – 8420HelicalSequence analysisAdd
BLAST
Transmembranei96 – 11621HelicalSequence analysisAdd
BLAST
Transmembranei128 – 14922HelicalSequence analysisAdd
BLAST
Transmembranei155 – 18228HelicalSequence analysisAdd
BLAST
Transmembranei253 – 27321HelicalSequence analysisAdd
BLAST
Transmembranei280 – 30021HelicalSequence analysisAdd
BLAST
Transmembranei320 – 34324HelicalSequence analysisAdd
BLAST
Transmembranei364 – 38118HelicalSequence analysisAdd
BLAST
Transmembranei387 – 40418HelicalSequence analysisAdd
BLAST
Transmembranei433 – 45220HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ08D71.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000054345.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2642. Eukaryota.
ENOG410YGXE. LUCA.
HOGENOMiHOG000240902.
HOVERGENiHBG053222.
KOiK03850.

Family and domain databases

InterProiIPR016900. Alg10.
[Graphical view]
PANTHERiPTHR12989. PTHR12989. 1 hit.
PfamiPF04922. DIE2_ALG10. 1 hit.
[Graphical view]
PIRSFiPIRSF028810. Alpha1_2_glucosyltferase_Alg10. 1 hit.

Sequencei

Sequence statusi: Complete.

Q08D71-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKLEGYYFS ALFSGCFLLS SILFSKITRQ QRDPYMDESF HIPQAQLYCQ
60 70 80 90 100
GHFNQWDPMI TTLPGLYLAS VGMVKPAAWL FGWSDSVACS SGMLRFINLL
110 120 130 140 150
FSLGNLYMIY LILSKINCKN KVSSFKKILS TLTLYAFPTL YFFTFLYYTD
160 170 180 190 200
TGSTFFVLFA YLMCLYGNHK SASLLGLCAF FFRQTNIIWI IFCAGNVISE
210 220 230 240 250
KLTEAWKTHL KKRDENPSAK GSVSEAVKAL VFLFQYCLSV RNIIMLVQLT
260 270 280 290 300
WPYITLVLGF FVFLSFNGGI VVGDKTSHEA CLNFPQLFYF LGFTLIFSFS
310 320 330 340 350
HLFSPQKLKE FIKSVWKQPL IYMALAGISV ILIWKFTYVH KYLLADNRHY
360 370 380 390 400
TFYVWRKIFQ RHELVKHLLV PGYLFAAWSF ADSLKGKSIF WLLMFYSCLL
410 420 430 440 450
AAMVPQKLLE FRYFIVPYII FRLNIPIPSV PKILLELALY VTINVFSFYL
460
FLHKTFQWPD NEQVQRFMW
Length:469
Mass (Da):54,789
Last modified:October 31, 2006 - v1
Checksum:i6984B02180C2A15F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC123914 mRNA. Translation: AAI23915.1.
RefSeqiNP_001016192.2. NM_001016192.3.
UniGeneiStr.26858.

Genome annotation databases

GeneIDi548946.
KEGGixtr:548946.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC123914 mRNA. Translation: AAI23915.1.
RefSeqiNP_001016192.2. NM_001016192.3.
UniGeneiStr.26858.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000054345.

Protein family/group databases

CAZyiGT59. Glycosyltransferase Family 59.

Proteomic databases

PaxDbiQ08D71.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi548946.
KEGGixtr:548946.

Organism-specific databases

CTDi84920.
XenbaseiXB-GENE-976267. alg10.

Phylogenomic databases

eggNOGiKOG2642. Eukaryota.
ENOG410YGXE. LUCA.
HOGENOMiHOG000240902.
HOVERGENiHBG053222.
KOiK03850.

Family and domain databases

InterProiIPR016900. Alg10.
[Graphical view]
PANTHERiPTHR12989. PTHR12989. 1 hit.
PfamiPF04922. DIE2_ALG10. 1 hit.
[Graphical view]
PIRSFiPIRSF028810. Alpha1_2_glucosyltferase_Alg10. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.

Entry informationi

Entry nameiQ08D71_XENTR
AccessioniPrimary (citable) accession number: Q08D71
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: March 16, 2016
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.