Q08CC3 (Q08CC3_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Zgc:153274 EMBL AAI24298.1

Gene names

Name:	galnt11 ZFIN ZDB-GENE-060929-998
ORF Names:	zgc:153274 ZFIN ZDB-GENE-060929-998

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI24298.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	590 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Cofactor	Calcium By similarity. SAAS SAAS001173 Manganese By similarity. SAAS SAAS001173
Pathway	Protein modification; protein glycosylation. SAAS SAAS001173
Sequence similarities	Contains 1 ricin B-type lectin domain. SAAS SAAS001173

Ontologies

Keywords
Cellular component	Golgi apparatus SAAS SAAS001173 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS001173
Ligand	Calcium SAAS SAAS001173 Lectin SAAS SAAS001173 Manganese SAAS SAAS001173
Molecular function	Glycosyltransferase SAAS SAAS000772 RuleBase RU003687 Transferase
PTM	Disulfide bond SAAS SAAS001173
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q08CC3 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 218C65EAE0D8FA5A	FASTA	590	67,491
	10 20 30 40 50 60 MGSVTLRYFC YGCLFTSVTW SILLFLYFNL SQESRLSFRN VPVRGQHRFQ PRFTRGPAVQ 70 80 90 100 110 120 HRDGSQVRKG QALEAVKPDL SPELGMIFNK QDQEVRDMGY HKHAFNVLIS NRLGYHRDVP 130 140 150 160 170 180 DTRTDKCRDR AYSVSLPTAS IVICFFNEAF SALLRTVHSV LDRTPNYLLH EIILVDDHSE 190 200 210 220 230 240 LDDLKEDLDS YVQQHLQKKV KVVRNEKREG LIRGRMIGAS HATGEVLVFL DSHCEVNEAW 250 260 270 280 290 300 LQPLLTPIKE NRKTVVCPVI DIISADTLVY TPSPIVRGGF NWGLHFKWDP VPMSELNSPD 310 320 330 340 350 360 GAIRSPTMAG GLFAMDRNYF YELGQYDRGM DIWGGENLEI SFRIWMCGGQ LLIVPCSRVG 370 380 390 400 410 420 HIFRKRRPYG SPGGQDTMAH NSLRLAHVWM DDYKEQYFAL RPELRNRDYG DISERVSIRK 430 440 450 460 470 480 RLQCHSFKWY LDNIYPEMQV SSPHKPQQPV FINKGLKRPK VLQRGRLRNL LADKCLVAQG 490 500 510 520 530 540 RPSQKGGAVV VKDCDPQDPE QEWAYDEEHE LVLAGLLCLD MSEIRSSDPP RLMKCHGSGG 550 560 570 580 590 SQQWTLGKKN WLYQVSVGQC LAVGDPLSIK GYVSMAICDD SRSQQWQLEG

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Gut EMBL AAI24298.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC124297 mRNA. Translation: AAI24298.1.
IPI	IPI00803998.
RefSeq	NP_001070030.2. NM_001076562.2.
UniGene	Dr.77799.
3D structure databases
ProteinModelPortal	Q08CC3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q08CC3.
Protein family/group databases
CAZy	CBM13. Carbohydrate-Binding Module Family 13. GT27. Glycosyltransferase Family 27.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	558716.
KEGG	dre:558716.
Organism-specific databases
CTD	63917.
ZFIN	ZDB-GENE-060929-998. galnt11.
Phylogenomic databases
eggNOG	fiNOG04400.
GeneTree	ENSGT00560000076662.
HOGENOM	HBG715048.
HOVERGEN	HBG051699.
InParanoid	Q08CC3.
OrthoDB	EOG4JQ3X7.
Gene expression databases
ArrayExpress	Q08CC3.
Bgee	Q08CC3.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
KO	K00710.
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
SUPFAM	SSF50370. RicinB_like. 1 hit.
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q08CC3_DANRE

Accession

Primary (citable) accession number: Q08CC3

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)