Zgc:153274 - Danio rerio (Zebrafish)

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Unreviewed, UniProtKB/TrEMBL Q08CC3 (Q08CC3_DANRE)

Last modified November 24, 2009. Version 30. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Zgc:153274 EMBL AAI24298.1

Gene names

Name:	galnt11 ZFIN ZDB-GENE-060929-998
ORF Names:	zgc:153274 ZFIN ZDB-GENE-060929-998

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI24298.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	590 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Pathway	Protein modification; protein glycosylation. Spearmint SPM000772
Sequence similarities	Contains 1 ricin B-type lectin domain. Spearmint SPM000772

Ontologies

Keywords
Cellular component	Golgi apparatus Spearmint SPM000772 Membrane
Domain	Transmembrane Spearmint SPM000772
Ligand	Calcium Spearmint SPM000772 Lectin Spearmint SPM000772 Manganese Spearmint SPM000772
Molecular function	Glycosyltransferase Spearmint SPM000772 RuleBase RU003687V0 Transferase
Gene Ontology (GO)
Cellular component	Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW manganese ion binding Inferred from electronic annotation. Source: UniProtKB-KW sugar binding Inferred from electronic annotation. Source: UniProtKB-KW transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q08CC3-1 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 218C65EAE0D8FA5A
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590

67,491

        10         20         30         40         50         60 
MGSVTLRYFC YGCLFTSVTW SILLFLYFNL SQESRLSFRN VPVRGQHRFQ PRFTRGPAVQ 

        70         80         90        100        110        120 
HRDGSQVRKG QALEAVKPDL SPELGMIFNK QDQEVRDMGY HKHAFNVLIS NRLGYHRDVP 

       130        140        150        160        170        180 
DTRTDKCRDR AYSVSLPTAS IVICFFNEAF SALLRTVHSV LDRTPNYLLH EIILVDDHSE 

       190        200        210        220        230        240 
LDDLKEDLDS YVQQHLQKKV KVVRNEKREG LIRGRMIGAS HATGEVLVFL DSHCEVNEAW 

       250        260        270        280        290        300 
LQPLLTPIKE NRKTVVCPVI DIISADTLVY TPSPIVRGGF NWGLHFKWDP VPMSELNSPD 

       310        320        330        340        350        360 
GAIRSPTMAG GLFAMDRNYF YELGQYDRGM DIWGGENLEI SFRIWMCGGQ LLIVPCSRVG 

       370        380        390        400        410        420 
HIFRKRRPYG SPGGQDTMAH NSLRLAHVWM DDYKEQYFAL RPELRNRDYG DISERVSIRK 

       430        440        450        460        470        480 
RLQCHSFKWY LDNIYPEMQV SSPHKPQQPV FINKGLKRPK VLQRGRLRNL LADKCLVAQG 

       490        500        510        520        530        540 
RPSQKGGAVV VKDCDPQDPE QEWAYDEEHE LVLAGLLCLD MSEIRSSDPP RLMKCHGSGG 

       550        560        570        580        590 
SQQWTLGKKN WLYQVSVGQC LAVGDPLSIK GYVSMAICDD SRSQQWQLEG

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Gut EMBL AAI24298.1.

Cross-references

Sequence databases
	BC124297 mRNA. Translation: AAI24298.1.
IPI	IPI00803998.
RefSeq	NP_001070030.2.
UniGene	Dr.77799
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	CBM13. Carbohydrate-Binding Module Family 13. GT27. Glycosyltransferase Family 27.
Genome annotation databases
Ensembl	ENSDART00000093163; ENSDARP00000087595; ENSDARG00000063636; Danio rerio. [Genome view]
GeneID	558716.
KEGG	dre:558716.
Organism-specific databases
ZFIN	ZDB-GENE-060929-998. galnt11.
Phylogenomic databases
HOVERGEN	Q08CC3.
PhylomeDB	Q08CC3.
Gene expression databases
ArrayExpress	Q08CC3.
Bgee	Q08CC3.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. IPR008997. Ricin_B-rel_lectin. IPR000772. Ricin_B_lectin. [Graphical view]
Pfam	PF00535. Glycos_transf_2. 1 hit. PF00652. Ricin_B_lectin. 1 hit. [Graphical view]
SMART	SM00458. RICIN. 1 hit. [Graphical view]
PROSITE	PS50231. RICIN_B_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q08CC3_DANRE

Accession

Primary (citable) accession number: Q08CC3

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	November 24, 2009
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information