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Protein
Submitted name:

Coagulation factor XIII, A1 polypeptide

Gene

f13a1b

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Cofactori

Ca2+UniRule annotationNote: Binds 1 Ca2+ ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei333UniRule annotation1
Active sitei392UniRule annotation1
Active sitei415UniRule annotation1
Metal bindingi455CalciumUniRule annotation1
Metal bindingi457CalciumUniRule annotation1
Metal bindingi504CalciumUniRule annotation1
Metal bindingi509CalciumUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Coagulation factor XIII, A1 polypeptideImported
Submitted name:
F13a1 proteinImported
Gene namesi
Name:f13a1bImported
Synonyms:f13a1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-030131-9634 f13a1b

Structurei

3D structure databases

SMRiQ08CA3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini325 – 418TGcInterPro annotationAdd BLAST94

Phylogenomic databases

eggNOGiENOG410IFMV Eukaryota
ENOG410XQEZ LUCA
HOGENOMiHOG000231695
HOVERGENiHBG004342
KOiK03917

Family and domain databases

Gene3Di2.60.40.10, 3 hits
3.90.260.10, 1 hit
InterProiView protein in InterPro
IPR034810 Factor_XIII_A
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
IPR002931 Transglutaminase-like
IPR036985 Transglutaminase-like_sf
IPR023608 Transglutaminase_animal
IPR008958 Transglutaminase_C
IPR036238 Transglutaminase_C_sf
IPR001102 Transglutaminase_N
PANTHERiPTHR11590:SF42 PTHR11590:SF42, 1 hit
PfamiView protein in Pfam
PF00927 Transglut_C, 2 hits
PF01841 Transglut_core, 1 hit
PF00868 Transglut_N, 1 hit
PIRSFiPIRSF000459 TGM_EBP42, 1 hit
SMARTiView protein in SMART
SM00460 TGc, 1 hit
SUPFAMiSSF49309 SSF49309, 2 hits
SSF81296 SSF81296, 1 hit

Sequencei

Sequence statusi: Complete.

Q08CA3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADQVAPENP TPAAAPTVRP KQRVSHRGRS AGGRASSNQQ EGKVEEFEPF
60 70 80 90 100
MLMPRGPPPL TEYLDIFDVD VLKQPNEVNK QAHHTHLYSS NFLIVRRAQE
110 120 130 140 150
FQIKITFNRP YKPAEDKFAV EFVIGPVPQY SKGTYIPVFP TAKRQSVWSG
160 170 180 190 200
RVIESSENVV TMGITPSAEC IVGKYMTYIG VETPYGIRRT RRDPNTDIYI
210 220 230 240 250
LFNPWSPADP VFLDDEEERE ECVMNELGII YHGAYDDVSE RAWNYGQFEF
260 270 280 290 300
GVLDACLFVM DKADMPLSNR GDVVKVTRVA SAMLNSRDDD GVLVGNWSGD
310 320 330 340 350
YMYGVPPTSW TGSVEILLDH ANSSGTPVCY AQCWVYAAVF NTFLRCLGIP
360 370 380 390 400
SRVVTNFFSA HDNDGNLKMD IILDENGKLD RNRTKDSIWN YHCWNECYMA
410 420 430 440 450
RPDLPSGFGG WQVVDATPQE TSDGMFRCGP ASVAAIKHGQ ICYPFDAPFV
460 470 480 490 500
FAEVNSDVVF YRRRKDGILE VVKVNQTHVG RMVLTKAVLH SGRRDITNQY
510 520 530 540 550
KFPEGSPEER RVLEKAEEFG CQREKSSPAL SDVDVEIHSL DVNVGENFDV
560 570 580 590 600
TLQFTNRSDQ RRTADVYITG TVVYYTGVPS GEVVFKTPKV KLEPMQSKEE
610 620 630 640 650
KVLVRSEDYM NKLVEQRNIH FIATGKIKET GQIITAMKVI AMHHPKLTVK
660 670 680 690 700
VTGSPRVSEE MYVSVEFTNP FKFSLENVDL RVEGPGVLPF KYKQYSVIAP
710 720 730 740
GTSITWTEAF SPRRAGSTKV FAKLDCAALR QVYGETELTV QE
Length:742
Mass (Da):83,579
Last modified:October 31, 2006 - v1
Checksum:iC681867FD58EBF83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC124320 mRNA Translation: AAI24321.1
BC165658 mRNA Translation: AAI65658.1
RefSeqiNP_001070622.1, NM_001077154.1
UniGeneiDr.16206

Genome annotation databases

GeneIDi561287
KEGGidre:561287

Similar proteinsi

Entry informationi

Entry nameiQ08CA3_DANRE
AccessioniPrimary (citable) accession number: Q08CA3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: April 25, 2018
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health