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Q08C36 (Q08C36_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Novel protein similar to vertebrate exostoses (Multiple)-like 2 (EXTL2) EMBL CAP09235.1

Si:dkey-60b12.3 Ensembl ENSDARP00000086549
Gene names
Name:extl2 ZFIN ZDB-GENE-060929-1122
Synonyms:si:dkey-60b12.3 Ensembl ENSDARP00000086549
ORF Names:DKEY-60B12.3-001 EMBL CAP09235.1, zgc:153688 ZFIN ZDB-GENE-060929-1122
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI24427.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Protein attributes

Sequence length332 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q08C36 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 0C4262EF582170C8

FASTA33238,273
        10         20         30         40         50         60 
MRVHLCCCRS LGRVRTHVVI GFILLLLLAG VSLTFLLPNN EDINILRELR RSSNTSRTLA 

        70         80         90        100        110        120 
DPEESFTIIM QTYNRTDVLL RLLNHYQAVP HLQCIIIVWN NPGETPPRRL WDELGPHPVP 

       130        140        150        160        170        180 
VLFREQRVNR MRNRLMMHPD VKTDAVLMLD DDILLSVPDI SFAFSVWKQF PDQIVGFVPR 

       190        200        210        220        230        240 
KHVSSASGVY SYGSFELQDP DKGGGDRYSM ILVGASFFHR RFLKQFQEQP AEVHTLLDRT 

       250        260        270        280        290        300 
QNCDDIAMNF IVARQLSKRP SGVFVKPVHM SNLEKDASSG FVGMWHRPEH MLQRSYCLNK 

       310        320        330 
LAQIYGHMPL RYSNIMITQL GFPSYANHKS RM 

« Hide

References

« Hide 'large scale' references
[1]Phillimore B.
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The genomic sequence of Danio rerio."
The Danio rerio Sequencing Project at the Sanger Institute
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000086549.
[3]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000086549.
[4]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Ovary EMBL AAI24427.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC124426 mRNA. Translation: AAI24427.1.
AL953893 Genomic DNA. Translation: CAP09235.1.
IPIIPI00505509.
RefSeqNP_001070029.1. NM_001076561.1.
UniGeneDr.78581.

3D structure databases

ProteinModelPortalQ08C36.
SMRQ08C36. Positions 64-329.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ08C36.

Protein family/group databases

CAZyGT64. Glycosyltransferase Family 64.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000092116; ENSDARP00000086549; ENSDARG00000063191.
GeneID558373.
KEGGdre:558373.
NMPDRfig|7955.3.peg.10807.

Organism-specific databases

CTD2135.
ZFINZDB-GENE-060929-1122. extl2.
ZDB-GENE-030131-3379. si:dkey-60b12.3.

Phylogenomic databases

eggNOGfiNOG06835.
GeneTreeENSGT00550000074496.
HOGENOMHBG713996.
HOVERGENHBG051525.
InParanoidQ08C36.
OMANHYQAVP.
OrthoDBEOG4RNB91.

Gene expression databases

BgeeQ08C36.

Family and domain databases

InterProIPR015338. HexNAc_Trfase_a.
[Graphical view]
KOK02369.
PfamPF09258. Glyco_transf_64. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ08C36_DANRE
AccessionPrimary (citable) accession number: Q08C36
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)