Reviewed,
UniProtKB/Swiss-Prot Q08AM6 (VAC14_HUMAN)
Last modified
November 25, 2008.
Version 18.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Protein VAC14 homolog Alternative name(s): Tax1-binding protein 2 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 782 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Tissue specificity | Ubiquitously expressed. |
| Induction | Interacts with HTLV-1 Tax. |
| Sequence similarities | Belongs to the VAC14 family. Contains 6 HEAT repeats. |
| Sequence caution | The sequence AAB03813.1 differs from that shown. Reason: Miscellaneous discrepancy. Unknown C-terminal region. |
Ontologies
Keywords | |
|---|---|
| Biological process | Host-virus interaction |
| Domain | Repeat |
Gene Ontology (GO) | |
| Biological process | interspecies interaction between organisms Inferred from electronic annotation. Source: UniProtKB-KW signal transduction Ref.3Non-traceable author statement. Source: UniProtKB |
| Molecular function | binding Inferred from electronic annotation. Source: InterPro receptor activity Ref.3Non-traceable author statement. Source: UniProtKB |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 782 | 782 | Protein VAC14 homolog | PRO_0000300485 | |||||
Regions | |||||||||
| Repeat | 5 – 42 | 38 | HEAT 1 | ||||||
| Repeat | 89 – 126 | 38 | HEAT 2 | ||||||
| Repeat | 171 – 208 | 38 | HEAT 3 | ||||||
| Repeat | 212 – 249 | 38 | HEAT 4 | ||||||
| Repeat | 438 – 475 | 38 | HEAT 5 | ||||||
| Repeat | 560 – 598 | 39 | HEAT 6 | ||||||
Experimental info | |||||||||
| Sequence conflict | 257 | 1 | A → P in AAB03813. Ref.3 | ||||||
| Sequence conflict | 263 | 1 | L → P in AAB03813. Ref.3 | ||||||
| Sequence conflict | 352 | 1 | T → A in CAG33624. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain and Lung. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 238-782. |
| [3] | "Isolation of a cDNA clone, TRX encoding a human T-cell lymphotrophic virus type-I Tax1 binding protein." Mireskandari A., Reid R.L., Kashanchi F., Dittmer J., Li W.B., Brady J.N. Biochim. Biophys. Acta 1306:9-13(1996) [PubMed: 8611628] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 244-366, TISSUE SPECIFICITY, INTERACTION WITH HTLV-I TAX. |
| [4] | "Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)." Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B. Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 259-782. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| BC000536 mRNA. Translation: AAH00536.2. BC007214 mRNA. Translation: AAH07214.2. BC125108 mRNA. Translation: AAI25109.1. BC125109 mRNA. Translation: AAI25110.1. AK025479 mRNA. Translation: BAB15145.1. Different initiation. U25801 mRNA. Translation: AAB03813.1. Sequence problems. CR457343 mRNA. Translation: CAG33624.1. | |
| PIR | S68091. |
| RefSeq | NP_060522.3. |
| UniGene | Hs.445061 |
3D structure databases | |
| ModBase | Search... |
PTM databases | |
| PhosphoSite | Q08AM6. |
Genome annotation databases | |
| Ensembl | ENSG00000103043. Homo sapiens. [Contig view] |
| GeneID | 55697. |
| KEGG | hsa:55697. |
Organism-specific databases | |
| HGNC | HGNC:25507. VAC14. |
| MIM | 604632. gene. |
| PharmGKB | PA142670633. |
| GenAtlas | Search... |
| GeneCards | Search... |
Phylogenomic databases | |
| HOVERGEN | Q08AM6. |
Gene expression databases | |
| ArrayExpress | Q08AM6. |
| CleanEx | HS_VAC14. |
Family and domain databases | |
| InterPro | IPR011989. ARM-like. IPR000357. HEAT. [Graphical view] |
| Gene3D | G3DSA:1.25.10.10. ARM-like. 1 hit. |
| Pfam | PF02985. HEAT. 1 hit. [Graphical view] |
| PROSITE | PS50077. HEAT_REPEAT. False negative. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 60525. |
| SOURCE | Search... |
Entry information
| Entry name | VAC14_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q08AM6 Secondary accession number(s): Q13174 Q9H6V6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| Human chromosome 16 Human chromosome 16: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


