Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Shewanella frigidimarina (strain NCIMB 400)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei142 – 1421UniRule annotation
Active sitei549 – 5491UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-205-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Sfri_0189Imported
OrganismiShewanella frigidimarina (strain NCIMB 400)Imported
Taxonomic identifieri318167 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000000684 Componenti: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi318167.Sfri_0189.

Structurei

3D structure databases

ProteinModelPortaliQ089L3.
SMRiQ089L3. Positions 9-882.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiCGMGVIA.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q089L3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEQTADMYA SLRSNVGHLG QILGETMQNH LGDAFLEKVE QIRILAKKSR
60 70 80 90 100
QGDEASREQM LALLTALPDE ELVPFAKAFN QFLNLANIAE QFHTISRNCD
110 120 130 140 150
ELVCVPDPVE QLLGRMLDTD LDKKDVIKSL KNLDIDLVLT AHPTEISRRT
160 170 180 190 200
LIQKYAAVVD CLTEQENSQL TDRERQQSTL RLRQLIAQIW HTNEIRNERP
210 220 230 240 250
TPVDEARWGL STIETSLWQA IPDFLRQLND QVEQKTGQQL PIDVSPVRFS
260 270 280 290 300
SWMGGDRDGN PFVTSLVTQE VLDRNRHAAA RLYLKDIVSL LGELSMEQAN
310 320 330 340 350
AELSALTDNS KEPYRDVLRK LRCQLHGTID YLNARLEGKK PDVDTSELIW
360 370 380 390 400
HKSDLLEPLE LLYKSLTDCG MKLIANGLLL DILRRLACFG IHMLRLDIRQ
410 420 430 440 450
DATRHSDVIA ELTRYLGMGD YNHWDENEKQ AFLLRELTSK RPLIPTNWKP
460 470 480 490 500
TDDVAEVVRT CNLVAQQPVN ALGSYVISMA SKPSDVLTVL LLLKEAGCTN
510 520 530 540 550
PMRVVPLFET LADLEGAADC MTSLLNIDWY RGYTKGMQEV MIGYSDSAKD
560 570 580 590 600
AGVMAAAWAQ YRAQEQLVAV CKKADVKLML FHGRGGSIGR GGGPAHKAIL
610 620 630 640 650
SQPPGSVDGR IRVTEQGEMI RFKFGLPKLA VQSLALYTSA VLEATLLPPP
660 670 680 690 700
EPKKSWRDCM QRIAEESVLH YRGIVREEPD FVEYFRSATP EVELGKLPLG
710 720 730 740 750
SRPAKRKVDG GIESLRAIPW IFAWSQNRLM LPAWLGAGEA LQDAADRGEL
760 770 780 790 800
ELLREMEEQW PFFETRISML EMVYTKAEPN LAKYYELCLV KPELHHLGEK
810 820 830 840 850
LRQRLQLGIE AVLSLTQATE LMSHTPWSRE SVKLRNPYID PLNFLQTELL
860 870 880
ARTRREVEPS ADVQLALMLT IAGVAAGMRN TG
Length:882
Mass (Da):99,486
Last modified:October 31, 2006 - v1
Checksum:iA2C9F5D321650745
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA. Translation: ABI70052.1.
RefSeqiWP_011635679.1. NC_008345.1.
YP_748890.1. NC_008345.1.

Genome annotation databases

EnsemblBacteriaiABI70052; ABI70052; Sfri_0189.
KEGGisfr:Sfri_0189.
PATRICi23494135. VBISheFri14343_0198.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA. Translation: ABI70052.1.
RefSeqiWP_011635679.1. NC_008345.1.
YP_748890.1. NC_008345.1.

3D structure databases

ProteinModelPortaliQ089L3.
SMRiQ089L3. Positions 9-882.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi318167.Sfri_0189.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI70052; ABI70052; Sfri_0189.
KEGGisfr:Sfri_0189.
PATRICi23494135. VBISheFri14343_0198.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiCGMGVIA.
OrthoDBiEOG6TJ7T8.

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-205-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NCIMB 400Imported.

Entry informationi

Entry nameiQ089L3_SHEFN
AccessioniPrimary (citable) accession number: Q089L3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: June 24, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.