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Q089K7 (Q089K7_SHEFN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Argininosuccinate lyase HAMAP-Rule MF_00006
Short name=ASAL HAMAP-Rule MF_00006
EC=4.3.2.1 HAMAP-Rule MF_00006
Alternative name(s):
Arginosuccinase HAMAP-Rule MF_00006
Gene names
Name:argH HAMAP-Rule MF_00006
Ordered Locus Names:Sfri_0195
OrganismShewanella frigidimarina (strain NCIMB 400) [Complete proteome] [HAMAP] EMBL ABI70058.1
Taxonomic identifier318167 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella ›

Protein attributes

Sequence length476 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

2-(N(omega)-L-arginino)succinate = fumarate + L-arginine. HAMAP-Rule MF_00006 SAAS SAAS009049

Pathway

Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. HAMAP-Rule MF_00006 SAAS SAAS009049

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00006 SAAS SAAS009049.

Sequence similarities

Belongs to the lyase 1 family. Argininosuccinate lyase subfamily. HAMAP-Rule MF_00006

Sequences

Sequence LengthMass (Da)Tools
Q089K7 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 950B3CC15A481FD7

FASTA47651,751
        10         20         30         40         50         60 
MTYSYIIKHP VLKTVFKTED TDMALWGGRF QGETSALFKL FNDSLPVDYR LFEQDVVGSI 

        70         80         90        100        110        120 
AWADAIASVG IITAKECTDL KAALNELLVE VGNDPQAIIS NGAEDIHSFV EQKLIAKVGD 

       130        140        150        160        170        180 
LGKKLHTGRS RNDQVATDLK LWCKKEGAAL LARLGTLHAE LIALAEREVD AVMPGYTHLQ 

       190        200        210        220        230        240 
RAQPVTFGHW ALAYVEMYER DISRLQDALN RADSCPLGSG ALAGTAYPID RHALAAALNF 

       250        260        270        280        290        300 
ARPTLNSLDS VSDRDHVVEL CSAASISMMH LSRMAEDLIF FNSGEANFIS LADEVTSGSS 

       310        320        330        340        350        360 
LMPQKKNPDA LELIRGKTGR VYGSLMGILT TMKALPLAYN KDMQEDKEGL FDVVDSWAIC 

       370        380        390        400        410        420 
LDMAALVLSG LKVNRPQALV AAQQGYANAT ELADYLVAKG MPFREAHHVV GEVVVFAIGE 

       430        440        450        460        470 
QKPIEDLSVA ELQKFANVIS DDVYPNLTIE ACLEKRDVLG GTAINQVQAV IAAKKA

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References

[1]"Complete sequence of Shewanella frigidimarina NCIMB 400."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H., Newman D., Tiedje J.M. expand/collapse author list , Zhou J., Romine M.F., Culley D.E., Serres M., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCIMB 400.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000447 Genomic DNA. Translation: ABI70058.1.
RefSeqYP_748896.1. NC_008345.1.

3D structure databases

ProteinModelPortalQ089K7.
SMRQ089K7. Positions 25-476.
ModBaseSearch...

Protein-protein interaction databases

STRING318167.Sfri_0195.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI70058; ABI70058; Sfri_0195.
GeneID4278121.
KEGGsfr:Sfri_0195.
PATRIC23494147. VBISheFri14343_0204.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0165.
HOGENOMHOG000242744.
KOK01755.
OMAKEGIFDA.
ProtClustDBPRK04833.

Enzyme and pathway databases

BioCycSFRI318167:GIXS-211-MONOMER.
UniPathwayUPA00068; UER00114.

Family and domain databases

Gene3D1.10.275.10. 1 hit.
HAMAPMF_00006. Arg_succ_lyase.
InterProIPR009049. Argininosuccinate_lyase.
IPR003031. D_crystallin.
IPR024083. Fumarase/histidase_N.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERPTHR11444:SF3. PTHR11444:SF3. 1 hit.
PfamPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR00838. argH. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ089K7_SHEFN
AccessionPrimary (citable) accession number: Q089K7
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info