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Q08975

- THI21_YEAST

UniProt

Q08975 - THI21_YEAST

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Protein
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI21
Gene
THI21, YPL258C
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and also probably that of HMP to HMP-P.1 Publication

Catalytic activityi

ATP + 4-amino-5-hydroxymethyl-2-methylpyrimidine = ADP + 4-amino-5-phosphonooxymethyl-2-methylpyrimidine.
ATP + 4-amino-2-methyl-5-phosphomethylpyrimidine = ADP + 4-amino-2-methyl-5-diphosphomethylpyrimidine.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei64 – 641Substrate By similarity

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. hydroxymethylpyrimidine kinase activity Source: SGD
  3. phosphomethylpyrimidine kinase activity Source: SGD
  4. thiaminase activity Source: InterPro

GO - Biological processi

  1. thiamine biosynthetic process Source: SGD
  2. thiamine diphosphate biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Biological processi

Thiamine biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER3O-81.
YEAST:MONOMER3O-81.
UniPathwayiUPA00060; UER00137.
UPA00060; UER00138.

Names & Taxonomyi

Protein namesi
Recommended name:
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI21 (EC:2.7.1.49, EC:2.7.4.7)
Alternative name(s):
Hydroxymethylpyrimidine kinase
Short name:
HMP kinase
Hydroxymethylpyrimidine phosphate kinase
Short name:
HMP-P kinase
Short name:
HMP-phosphate kinase
Short name:
HMPP kinase
Gene namesi
Name:THI21
Ordered Locus Names:YPL258C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome XVI

Organism-specific databases

CYGDiYPL258c.
SGDiS000006179. THI21.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 551551Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI21
PRO_0000192042Add
BLAST

Proteomic databases

PaxDbiQ08975.

Expressioni

Inductioni

By absence of thiamine.1 Publication

Gene expression databases

GenevestigatoriQ08975.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
RSP5P399401EBI-30327,EBI-16219

Protein-protein interaction databases

BioGridi35954. 16 interactions.
DIPiDIP-5635N.
IntActiQ08975. 2 interactions.
MINTiMINT-522674.
STRINGi4932.YPL258C.

Structurei

3D structure databases

ProteinModelPortaliQ08975.
SMRiQ08975. Positions 2-551.

Family & Domainsi

Sequence similaritiesi

In the N-terminal section; belongs to the ThiD family.
In the C-terminal section; belongs to the thiaminase-2 family.

Phylogenomic databases

eggNOGiCOG0351.
GeneTreeiENSGT00390000003953.
HOGENOMiHOG000225275.
KOiK00877.
OMAiARISCIA.
OrthoDBiEOG75MW5D.

Family and domain databases

Gene3Di1.20.910.10. 1 hit.
3.40.1190.20. 1 hit.
InterProiIPR016084. Haem_Oase-like_multi-hlx.
IPR004399. HMP/HMP-P_kinase.
IPR013749. PM/HMP-P_kinase-1.
IPR029056. Ribokinase-like.
IPR004305. Thiaminase-2/PQQC.
IPR027574. Thiaminase_II.
[Graphical view]
PfamiPF08543. Phos_pyr_kin. 1 hit.
PF03070. TENA_THI-4. 1 hit.
[Graphical view]
SUPFAMiSSF48613. SSF48613. 1 hit.
SSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR00097. HMP-P_kinase. 1 hit.
TIGR04306. salvage_TenA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q08975-1 [UniParc]FASTAAdd to Basket

« Hide

MTYSTVNINT PPPYLALASN EKLPTVLSIA GTDPSGGAGV EADVKTITAH    50
RCYAMTCITA LNAQTPVKVY SINNTPKEVV SQILDANLQD MKCDVIKTGM 100
LTTAAIEVLH EKLLQLGENR PKLVVDPVLV ATSGSSLAGK DIASLITEKI 150
APFADILTPN IPECFKLLGE DREISKLRDI FEVAKDLAKI TKCSNILVKG 200
GHIPWNDEEG KYITDVLYLG AEQRFITFKG NFVNTTHTHG TGCTLASAIA 250
SNLARGYSLP QSVYGGIEYV QNAVAIGCDV TKETVKDNGP INHVYAIEIP 300
LEKMLSDECF TASDAVHKKP VKSSLNKIPG GSFYKYLINH PKVKPHWDSY 350
VNHDFVRKVA DGSLEPKKFQ FFIEQDYLYL VNYARISCIA GSKSPCLEDL 400
EKELVIVECV RNGLCQHERR LREEFGIKDP DYLQKIQRGP ALRAYCRYFN 450
DVSRRGNWQE LVIALNPCLM GYVHALTKIK DEVTAAEGSV YREWCETYSS 500
SWCHEAMLEG EKLLNHILET YPPEKLDTLV TIYAEVCELE ANFWTAALEY 550
E 551
Length:551
Mass (Da):61,334
Last modified:November 1, 1996 - v1
Checksum:iB8FD8D7DF6A25961
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z73614 Genomic DNA. Translation: CAA97986.1.
BK006949 Genomic DNA. Translation: DAA11177.1.
PIRiS65289.
RefSeqiNP_015065.1. NM_001184072.1.

Genome annotation databases

EnsemblFungiiYPL258C; YPL258C; YPL258C.
GeneIDi855870.
KEGGisce:YPL258C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z73614 Genomic DNA. Translation: CAA97986.1 .
BK006949 Genomic DNA. Translation: DAA11177.1 .
PIRi S65289.
RefSeqi NP_015065.1. NM_001184072.1.

3D structure databases

ProteinModelPortali Q08975.
SMRi Q08975. Positions 2-551.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 35954. 16 interactions.
DIPi DIP-5635N.
IntActi Q08975. 2 interactions.
MINTi MINT-522674.
STRINGi 4932.YPL258C.

Proteomic databases

PaxDbi Q08975.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YPL258C ; YPL258C ; YPL258C .
GeneIDi 855870.
KEGGi sce:YPL258C.

Organism-specific databases

CYGDi YPL258c.
SGDi S000006179. THI21.

Phylogenomic databases

eggNOGi COG0351.
GeneTreei ENSGT00390000003953.
HOGENOMi HOG000225275.
KOi K00877.
OMAi ARISCIA.
OrthoDBi EOG75MW5D.

Enzyme and pathway databases

UniPathwayi UPA00060 ; UER00137 .
UPA00060 ; UER00138 .
BioCyci MetaCyc:MONOMER3O-81.
YEAST:MONOMER3O-81.

Miscellaneous databases

NextBioi 980502.

Gene expression databases

Genevestigatori Q08975.

Family and domain databases

Gene3Di 1.20.910.10. 1 hit.
3.40.1190.20. 1 hit.
InterProi IPR016084. Haem_Oase-like_multi-hlx.
IPR004399. HMP/HMP-P_kinase.
IPR013749. PM/HMP-P_kinase-1.
IPR029056. Ribokinase-like.
IPR004305. Thiaminase-2/PQQC.
IPR027574. Thiaminase_II.
[Graphical view ]
Pfami PF08543. Phos_pyr_kin. 1 hit.
PF03070. TENA_THI-4. 1 hit.
[Graphical view ]
SUPFAMi SSF48613. SSF48613. 1 hit.
SSF53613. SSF53613. 1 hit.
TIGRFAMsi TIGR00097. HMP-P_kinase. 1 hit.
TIGR04306. salvage_TenA. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI."
    Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M.
    , Coster F., Davis K., Davis R.W., Dietrich F.S., Delius H., DiPaolo T., Dubois E., Duesterhoeft A., Duncan M., Floeth M., Fortin N., Friesen J.D., Fritz C., Goffeau A., Hall J., Hebling U., Heumann K., Hilbert H., Hillier L.W., Hunicke-Smith S., Hyman R.W., Johnston M., Kalman S., Kleine K., Komp C., Kurdi O., Lashkari D., Lew H., Lin A., Lin D., Louis E.J., Marathe R., Messenguy F., Mewes H.-W., Mirtipati S., Moestl D., Mueller-Auer S., Namath A., Nentwich U., Oefner P., Pearson D., Petel F.X., Pohl T.M., Purnelle B., Rajandream M.A., Rechmann S., Rieger M., Riles L., Roberts D., Schaefer M., Scharfe M., Scherens B., Schramm S., Schroeder M., Sdicu A.-M., Tettelin H., Urrestarazu L.A., Ushinsky S., Vierendeels F., Vissers S., Voss H., Walsh S.V., Wambutt R., Wang Y., Wedler E., Wedler H., Winnett E., Zhong W.-W., Zollner A., Vo D.H., Hani J.
    Nature 387:103-105(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. "Genetic redundancy and gene fusion in the genome of the Baker's yeast Saccharomyces cerevisiae: functional characterization of a three-member gene family involved in the thiamine biosynthetic pathway."
    Llorente B., Fairhead C., Dujon B.
    Mol. Microbiol. 32:1140-1152(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION AS A HMPP KINASE, INDUCTION.

Entry informationi

Entry nameiTHI21_YEAST
AccessioniPrimary (citable) accession number: Q08975
Secondary accession number(s): D6W3B1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 2005
Last sequence update: November 1, 1996
Last modified: September 3, 2014
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome XVI
    Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names

External Data

Dasty 3

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