Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative ISWI chromatin-remodeling complex subunit YPL216W

Gene

YPL216W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

May be required for the activity of an ISWI chromatin-remodeling complex.By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Chromatin regulator, Repressor

Keywords - Biological processi

Transcription, Transcription regulation

Enzyme and pathway databases

BioCyciYEAST:G3O-34105-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ISWI chromatin-remodeling complex subunit YPL216W
Gene namesi
Ordered Locus Names:YPL216W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XVI

Organism-specific databases

EuPathDBiFungiDB:YPL216W.
SGDiS000006137. YPL216W.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11021102Putative ISWI chromatin-remodeling complex subunit YPL216WPRO_0000242161Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi35969. 54 interactions.
DIPiDIP-3968N.
MINTiMINT-547880.

Structurei

3D structure databases

ProteinModelPortaliQ08964.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini23 – 131109WACPROSITE-ProRule annotationAdd
BLAST
Domaini375 – 43561DDTPROSITE-ProRule annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili673 – 74371Sequence analysisAdd
BLAST

Sequence similaritiesi

Contains 1 DDT domain.PROSITE-ProRule annotation
Contains 1 WAC domain.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil

Phylogenomic databases

GeneTreeiENSGT00530000066815.
InParanoidiQ08964.
OrthoDBiEOG7TTQHC.

Family and domain databases

InterProiIPR018501. DDT_dom.
IPR028941. WHIM2_dom.
IPR013136. WSTF_Acf1_Cbp146.
[Graphical view]
PfamiPF02791. DDT. 1 hit.
PF10537. WAC_Acf1_DNA_bd. 1 hit.
PF15613. WSD. 1 hit.
[Graphical view]
SMARTiSM00571. DDT. 1 hit.
[Graphical view]
PROSITEiPS50827. DDT. 1 hit.
PS51136. WAC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q08964-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLLNRRKIQ PKEIGQSADS FSETPWVIKE SSERINDYDS DLKKLDFYKR
60 70 80 90 100
DIFTCEISGK DGLSYFKALK SEEQHREKVR YLLPKELRKA IANFANFSPI
110 120 130 140 150
RKVGHLVESA FQRFSNRFFI GDTVCLKTIQ KNALITYKEG EPNLVESPTI
160 170 180 190 200
ENNVTLFLVK DVFQSNGMME SEKGEISAPK LSLYLITECL NRESKGAALI
210 220 230 240 250
VGQNEIKRPE SHFSKFIIAC FLNEILIKVS NKEHAPWRVK QEYIERYDVN
260 270 280 290 300
PKCSPNMIDY LPDRMNSSSS ELYTPLTIPP ESDVEPADWK ETSETSETSE
310 320 330 340 350
TSLSKIKAID DEISVSFDHI YDNVNSLAYN DLKGTVDDKE LPFTGPSIPF
360 370 380 390 400
ENISYLDSSL EYKNIDQKWF KECSQFPTER LLVVYQFLSF FGRFIGLSHF
410 420 430 440 450
NFDQFLTTIK CTSPEALVDE YVKINFLKTY NSKGSFTNEK PRNEIYNQVT
460 470 480 490 500
SSNVSQREKA NVFNADESQR IPSNFTRNQK MRKFITDKST EFVMYSIFKG
510 520 530 540 550
KPLKNDDMEF QSYEKVNILY IDIVCSLMCL MTDNEPDWNC NLMDNWTEEK
560 570 580 590 600
RKEEGNKTEI DIAIEKCLNY GDTSWVKLLH NKNFSNGNWL ICLLGILQQN
610 620 630 640 650
THMIAYSDVA KCITKKILPL SMNFVNLGDE LWDNFRKRLS IKDKIDVLWV
660 670 680 690 700
LVDFASNFSS YIKELVDKVP KLCNGIRLKL DSAKKEYIKL KRQLKTLTKN
710 720 730 740 750
RVKLHSNVSM NRYGSDECKG KVNALKVKIA YLMEDIAFLE AKLIQSDIKR
760 770 780 790 800
LEILGKDRNG NRYYWMDSNG SSSAISEKNE ELYNCCFLWV QGPSEADINF
810 820 830 840 850
CLDVDVESLK KWELLAKAKG TAYATKEVFS IFRSTDGSYY QIAQGENFMI
860 870 880 890 900
INSNGILMRP TIPAFIDKKI ISETPEKLLL SHHQWAFFND IEDIHMLVDR
910 920 930 940 950
LDDLRENEGQ LKKALTSKMD RIEVSYKQQF KIKRRIECDE TFKKNHKLLK
960 970 980 990 1000
NNEFTFPELK RIETTCTSNG QHFSNMEKIS KKLSRTKNDL VLEAILKDVA
1010 1020 1030 1040 1050
HLGECERALL KKQQNLIYPL NFHFEQLRTI DLEFIVETKR KRQEDILTKL
1060 1070 1080 1090 1100
LNHQRYKHIS HVSGYGISSQ RVDKAAHLDV QGILEEIECQ LISRRREDEE

RN
Length:1,102
Mass (Da):128,133
Last modified:November 1, 1996 - v1
Checksum:iE457A8CE097255D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z73572 Genomic DNA. Translation: CAA97931.1.
BK006949 Genomic DNA. Translation: DAA11220.1.
PIRiS65235.
RefSeqiNP_015108.1. NM_001184030.1.

Genome annotation databases

EnsemblFungiiYPL216W; YPL216W; YPL216W.
GeneIDi855885.
KEGGisce:YPL216W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z73572 Genomic DNA. Translation: CAA97931.1.
BK006949 Genomic DNA. Translation: DAA11220.1.
PIRiS65235.
RefSeqiNP_015108.1. NM_001184030.1.

3D structure databases

ProteinModelPortaliQ08964.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi35969. 54 interactions.
DIPiDIP-3968N.
MINTiMINT-547880.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYPL216W; YPL216W; YPL216W.
GeneIDi855885.
KEGGisce:YPL216W.

Organism-specific databases

EuPathDBiFungiDB:YPL216W.
SGDiS000006137. YPL216W.

Phylogenomic databases

GeneTreeiENSGT00530000066815.
InParanoidiQ08964.
OrthoDBiEOG7TTQHC.

Enzyme and pathway databases

BioCyciYEAST:G3O-34105-MONOMER.

Miscellaneous databases

NextBioi980547.
PROiQ08964.

Family and domain databases

InterProiIPR018501. DDT_dom.
IPR028941. WHIM2_dom.
IPR013136. WSTF_Acf1_Cbp146.
[Graphical view]
PfamiPF02791. DDT. 1 hit.
PF10537. WAC_Acf1_DNA_bd. 1 hit.
PF15613. WSD. 1 hit.
[Graphical view]
SMARTiSM00571. DDT. 1 hit.
[Graphical view]
PROSITEiPS50827. DDT. 1 hit.
PS51136. WAC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI."
    Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M.
    , Coster F., Davis K., Davis R.W., Dietrich F.S., Delius H., DiPaolo T., Dubois E., Duesterhoeft A., Duncan M., Floeth M., Fortin N., Friesen J.D., Fritz C., Goffeau A., Hall J., Hebling U., Heumann K., Hilbert H., Hillier L.W., Hunicke-Smith S., Hyman R.W., Johnston M., Kalman S., Kleine K., Komp C., Kurdi O., Lashkari D., Lew H., Lin A., Lin D., Louis E.J., Marathe R., Messenguy F., Mewes H.-W., Mirtipati S., Moestl D., Mueller-Auer S., Namath A., Nentwich U., Oefner P., Pearson D., Petel F.X., Pohl T.M., Purnelle B., Rajandream M.A., Rechmann S., Rieger M., Riles L., Roberts D., Schaefer M., Scharfe M., Scherens B., Schramm S., Schroeder M., Sdicu A.-M., Tettelin H., Urrestarazu L.A., Ushinsky S., Vierendeels F., Vissers S., Voss H., Walsh S.V., Wambutt R., Wang Y., Wedler E., Wedler H., Winnett E., Zhong W.-W., Zollner A., Vo D.H., Hani J.
    Nature 387:103-105(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYP216_YEAST
AccessioniPrimary (citable) accession number: Q08964
Secondary accession number(s): D6W3F4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 3060 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome XVI
    Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.