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Q08932

- RSA1_YEAST

UniProt

Q08932 - RSA1_YEAST

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Protein

Ribosome assembly 1 protein

Gene

RSA1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

Involved in a late nucleoplasmic step of 60S ribosomal subunit assembly.

GO - Biological processi

  1. ribosomal large subunit assembly Source: SGD
Complete GO annotation...

Keywords - Biological processi

Ribosome biogenesis

Enzyme and pathway databases

BioCyciYEAST:G3O-34086-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome assembly 1 protein
Gene namesi
Name:RSA1
Ordered Locus Names:YPL193W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome XVI

Organism-specific databases

CYGDiYPL193w.
SGDiS000006114. RSA1.

Subcellular locationi

GO - Cellular componenti

  1. nucleoplasm Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 381381Ribosome assembly 1 proteinPRO_0000097460Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei1 – 11N-acetylmethionine1 Publication
Modified residuei172 – 1721Phosphoserine1 Publication

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

MaxQBiQ08932.
PaxDbiQ08932.

Expressioni

Gene expression databases

GenevestigatoriQ08932.

Interactioni

Protein-protein interaction databases

BioGridi35990. 20 interactions.
DIPiDIP-5698N.
IntActiQ08932. 2 interactions.
MINTiMINT-511275.
STRINGi4932.YPL193W.

Structurei

Secondary structure

1
381
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi239 – 25618Combined sources
Helixi320 – 33415Combined sources
Helixi343 – 3497Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2M3FNMR-A238-259[»]
2MJFNMR-A317-352[»]
ProteinModelPortaliQ08932.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG38968.
HOGENOMiHOG000000983.
InParanoidiQ08932.
KOiK14853.
OMAiSSYCENT.
OrthoDBiEOG722JK2.

Family and domain databases

InterProiIPR019496. NUFIP1_cons_dom.
[Graphical view]
PfamiPF10453. NUFIP1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q08932-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNYNNFENSK GDGHSRLPKP TYSGTLSDGY DESKIKRQKT DSAFNAAYSP
60 70 80 90 100
HMYPNSPYYE GSWNTGYTPQ LHHVAPHNQY FHPIQPSTQY NYTSPPNYTE
110 120 130 140 150
NYIPPVHQNI SYAPALNLQK WPSSYCENTQ ALKNDKDYQT SISYEDVAIP
160 170 180 190 200
TVKEIQLIEK NRGKDTFMNE ISPVPSSKDQ ASAEPTEIPR KDPELANSNA
210 220 230 240 250
EDDHNNLGLE DDDRDEQLES EGLGKVVLVP GTSIALITDE DVKKWREERK
260 270 280 290 300
KMWLLKISNN KQKHMQEMGI KEDELKSQPS IFKESRKEKQ FIQSIQNQVQ
310 320 330 340 350
RGNPKIDLNL KLIQREFANE NSQLLDFIRE LGDVGLLEYE LSQQEKDVLF
360 370 380
GSSEDNNKNH YKPNYKNRKP NLSRANFTRN K
Length:381
Mass (Da):43,998
Last modified:November 1, 1996 - v1
Checksum:i16058BA430E0F310
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z73549 Genomic DNA. Translation: CAA97906.1.
BK006949 Genomic DNA. Translation: DAA11241.1.
PIRiS65212.
RefSeqiNP_015131.1. NM_001184007.1.

Genome annotation databases

EnsemblFungiiYPL193W; YPL193W; YPL193W.
GeneIDi855908.
KEGGisce:YPL193W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z73549 Genomic DNA. Translation: CAA97906.1 .
BK006949 Genomic DNA. Translation: DAA11241.1 .
PIRi S65212.
RefSeqi NP_015131.1. NM_001184007.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2M3F NMR - A 238-259 [» ]
2MJF NMR - A 317-352 [» ]
ProteinModelPortali Q08932.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 35990. 20 interactions.
DIPi DIP-5698N.
IntActi Q08932. 2 interactions.
MINTi MINT-511275.
STRINGi 4932.YPL193W.

Proteomic databases

MaxQBi Q08932.
PaxDbi Q08932.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YPL193W ; YPL193W ; YPL193W .
GeneIDi 855908.
KEGGi sce:YPL193W.

Organism-specific databases

CYGDi YPL193w.
SGDi S000006114. RSA1.

Phylogenomic databases

eggNOGi NOG38968.
HOGENOMi HOG000000983.
InParanoidi Q08932.
KOi K14853.
OMAi SSYCENT.
OrthoDBi EOG722JK2.

Enzyme and pathway databases

BioCyci YEAST:G3O-34086-MONOMER.

Miscellaneous databases

NextBioi 980610.

Gene expression databases

Genevestigatori Q08932.

Family and domain databases

InterProi IPR019496. NUFIP1_cons_dom.
[Graphical view ]
Pfami PF10453. NUFIP1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI."
    Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M.
    , Coster F., Davis K., Davis R.W., Dietrich F.S., Delius H., DiPaolo T., Dubois E., Duesterhoeft A., Duncan M., Floeth M., Fortin N., Friesen J.D., Fritz C., Goffeau A., Hall J., Hebling U., Heumann K., Hilbert H., Hillier L.W., Hunicke-Smith S., Hyman R.W., Johnston M., Kalman S., Kleine K., Komp C., Kurdi O., Lashkari D., Lew H., Lin A., Lin D., Louis E.J., Marathe R., Messenguy F., Mewes H.-W., Mirtipati S., Moestl D., Mueller-Auer S., Namath A., Nentwich U., Oefner P., Pearson D., Petel F.X., Pohl T.M., Purnelle B., Rajandream M.A., Rechmann S., Rieger M., Riles L., Roberts D., Schaefer M., Scharfe M., Scherens B., Schramm S., Schroeder M., Sdicu A.-M., Tettelin H., Urrestarazu L.A., Ushinsky S., Vierendeels F., Vissers S., Voss H., Walsh S.V., Wambutt R., Wang Y., Wedler E., Wedler H., Winnett E., Zhong W.-W., Zollner A., Vo D.H., Hani J.
    Nature 387:103-105(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. "Synthetic lethality with conditional dbp6 alleles identifies Rsa1p, a nucleoplasmic protein involved in the assembly of 60S ribosomal subunits."
    Kressler D., Doere M., Rojo M., Linder P.
    Mol. Cell. Biol. 19:8633-8645(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: CHARACTERIZATION.
  4. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  5. "A multidimensional chromatography technology for in-depth phosphoproteome analysis."
    Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
    Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-172, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  6. Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT MET-1, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiRSA1_YEAST
AccessioniPrimary (citable) accession number: Q08932
Secondary accession number(s): D6W3H5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 1, 1996
Last modified: November 26, 2014
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 259 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome XVI
    Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names

External Data

Dasty 3