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Q08932

- RSA1_YEAST

UniProt

Q08932 - RSA1_YEAST

Protein

Ribosome assembly 1 protein

Gene

RSA1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 96 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Functioni

    Involved in a late nucleoplasmic step of 60S ribosomal subunit assembly.

    GO - Biological processi

    1. ribosomal large subunit assembly Source: SGD

    Keywords - Biological processi

    Ribosome biogenesis

    Enzyme and pathway databases

    BioCyciYEAST:G3O-34086-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribosome assembly 1 protein
    Gene namesi
    Name:RSA1
    Ordered Locus Names:YPL193W
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome XVI

    Organism-specific databases

    CYGDiYPL193w.
    SGDiS000006114. RSA1.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleoplasm Source: SGD

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 381381Ribosome assembly 1 proteinPRO_0000097460Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei1 – 11N-acetylmethionine1 Publication
    Modified residuei172 – 1721Phosphoserine1 Publication

    Keywords - PTMi

    Acetylation, Phosphoprotein

    Proteomic databases

    MaxQBiQ08932.
    PaxDbiQ08932.

    Expressioni

    Gene expression databases

    GenevestigatoriQ08932.

    Interactioni

    Protein-protein interaction databases

    BioGridi35990. 20 interactions.
    DIPiDIP-5698N.
    IntActiQ08932. 2 interactions.
    MINTiMINT-511275.
    STRINGi4932.YPL193W.

    Structurei

    Secondary structure

    1
    381
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi239 – 25618

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2M3FNMR-A238-259[»]
    ProteinModelPortaliQ08932.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG38968.
    HOGENOMiHOG000000983.
    KOiK14853.
    OMAiSSYCENT.
    OrthoDBiEOG722JK2.

    Family and domain databases

    InterProiIPR019496. NUFIP1_cons_dom.
    [Graphical view]
    PfamiPF10453. NUFIP1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q08932-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNYNNFENSK GDGHSRLPKP TYSGTLSDGY DESKIKRQKT DSAFNAAYSP    50
    HMYPNSPYYE GSWNTGYTPQ LHHVAPHNQY FHPIQPSTQY NYTSPPNYTE 100
    NYIPPVHQNI SYAPALNLQK WPSSYCENTQ ALKNDKDYQT SISYEDVAIP 150
    TVKEIQLIEK NRGKDTFMNE ISPVPSSKDQ ASAEPTEIPR KDPELANSNA 200
    EDDHNNLGLE DDDRDEQLES EGLGKVVLVP GTSIALITDE DVKKWREERK 250
    KMWLLKISNN KQKHMQEMGI KEDELKSQPS IFKESRKEKQ FIQSIQNQVQ 300
    RGNPKIDLNL KLIQREFANE NSQLLDFIRE LGDVGLLEYE LSQQEKDVLF 350
    GSSEDNNKNH YKPNYKNRKP NLSRANFTRN K 381
    Length:381
    Mass (Da):43,998
    Last modified:November 1, 1996 - v1
    Checksum:i16058BA430E0F310
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z73549 Genomic DNA. Translation: CAA97906.1.
    BK006949 Genomic DNA. Translation: DAA11241.1.
    PIRiS65212.
    RefSeqiNP_015131.1. NM_001184007.1.

    Genome annotation databases

    EnsemblFungiiYPL193W; YPL193W; YPL193W.
    GeneIDi855908.
    KEGGisce:YPL193W.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z73549 Genomic DNA. Translation: CAA97906.1 .
    BK006949 Genomic DNA. Translation: DAA11241.1 .
    PIRi S65212.
    RefSeqi NP_015131.1. NM_001184007.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2M3F NMR - A 238-259 [» ]
    ProteinModelPortali Q08932.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 35990. 20 interactions.
    DIPi DIP-5698N.
    IntActi Q08932. 2 interactions.
    MINTi MINT-511275.
    STRINGi 4932.YPL193W.

    Proteomic databases

    MaxQBi Q08932.
    PaxDbi Q08932.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YPL193W ; YPL193W ; YPL193W .
    GeneIDi 855908.
    KEGGi sce:YPL193W.

    Organism-specific databases

    CYGDi YPL193w.
    SGDi S000006114. RSA1.

    Phylogenomic databases

    eggNOGi NOG38968.
    HOGENOMi HOG000000983.
    KOi K14853.
    OMAi SSYCENT.
    OrthoDBi EOG722JK2.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-34086-MONOMER.

    Miscellaneous databases

    NextBioi 980610.

    Gene expression databases

    Genevestigatori Q08932.

    Family and domain databases

    InterProi IPR019496. NUFIP1_cons_dom.
    [Graphical view ]
    Pfami PF10453. NUFIP1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI."
      Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M.
      , Coster F., Davis K., Davis R.W., Dietrich F.S., Delius H., DiPaolo T., Dubois E., Duesterhoeft A., Duncan M., Floeth M., Fortin N., Friesen J.D., Fritz C., Goffeau A., Hall J., Hebling U., Heumann K., Hilbert H., Hillier L.W., Hunicke-Smith S., Hyman R.W., Johnston M., Kalman S., Kleine K., Komp C., Kurdi O., Lashkari D., Lew H., Lin A., Lin D., Louis E.J., Marathe R., Messenguy F., Mewes H.-W., Mirtipati S., Moestl D., Mueller-Auer S., Namath A., Nentwich U., Oefner P., Pearson D., Petel F.X., Pohl T.M., Purnelle B., Rajandream M.A., Rechmann S., Rieger M., Riles L., Roberts D., Schaefer M., Scharfe M., Scherens B., Schramm S., Schroeder M., Sdicu A.-M., Tettelin H., Urrestarazu L.A., Ushinsky S., Vierendeels F., Vissers S., Voss H., Walsh S.V., Wambutt R., Wang Y., Wedler E., Wedler H., Winnett E., Zhong W.-W., Zollner A., Vo D.H., Hani J.
      Nature 387:103-105(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    2. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    3. "Synthetic lethality with conditional dbp6 alleles identifies Rsa1p, a nucleoplasmic protein involved in the assembly of 60S ribosomal subunits."
      Kressler D., Doere M., Rojo M., Linder P.
      Mol. Cell. Biol. 19:8633-8645(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: CHARACTERIZATION.
    4. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
    5. "A multidimensional chromatography technology for in-depth phosphoproteome analysis."
      Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
      Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-172, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    6. Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT MET-1, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiRSA1_YEAST
    AccessioniPrimary (citable) accession number: Q08932
    Secondary accession number(s): D6W3H5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 2000
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 96 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 259 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    3. Yeast chromosome XVI
      Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names

    External Data

    Dasty 3