Reviewed,
UniProtKB/Swiss-Prot Q08932 (RSA1_YEAST)
Last modified
November 24, 2009.
Version 64.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Ribosome assembly 1 protein | ||||
| Gene names |
| ||||
| Organism | Saccharomyces cerevisiae (Baker's yeast) [Complete proteome] | ||||
| Taxonomic identifier | 4932 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 381 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
Ontologies
| Keywords | |
|---|---|
| Biological process | Ribosome biogenesis |
| Cellular component | Nucleus |
| PTM | Phosphoprotein |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | ribosomal large subunit assembly Ref.2 Inferred from mutant phenotype. Source: SGD |
| Cellular component | nucleoplasm Ref.2 Inferred from direct assay. Source: SGD |
| Molecular function | protein binding Inferred from physical interaction. Source: IntAct |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| HIT1 | P46973 | 1 | EBI-16186,EBI-8359 | |
| PFK1 | P16861 | 1 | EBI-16186,EBI-9428 |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI." Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M. Hani J.Nature 387:103-105(1997) [PubMed: 9169875] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204511 / S288c / AB972. |
| [2] | "Synthetic lethality with conditional dbp6 alleles identifies Rsa1p, a nucleoplasmic protein involved in the assembly of 60S ribosomal subunits." Kressler D., Doere M., Rojo M., Linder P. Mol. Cell. Biol. 19:8633-8645(1999) [PubMed: 10567587] [Abstract] Cited for: CHARACTERIZATION. |
| [3] | "Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. |
| [4] | "A multidimensional chromatography technology for in-depth phosphoproteome analysis." Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H. Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed: 18407956] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-172, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| Z73549 Genomic DNA. Translation: CAA97906.1. | |
| PIR | S65212. |
| RefSeq | NP_015131.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP:5698N. |
| IntAct | Q08932. 3 interactions. |
| STRING | Q08932. |
Genome annotation databases | |
| Ensembl | YPL193W; YPL193W; YPL193W; Saccharomyces cerevisiae. [Genome view] |
| GeneID | 855908. |
| KEGG | sce:YPL193W. |
| NMPDR | fig|4932.3.peg.6259. |
Organism-specific databases | |
| CYGD | YPL193w. |
| SGD | S000006114. RSA1. |
Phylogenomic databases | |
| HOGENOM | Q08932. |
| OrthoDB | EOG9DNGMP |
Gene expression databases | |
| ArrayExpress | Q08932. |
| Genevestigator | Q08932. |
| GermOnline | YPL193W. Saccharomyces cerevisiae. |
Family and domain databases | |
| InterPro | IPR019496. NUFIP1_cons_reg. [Graphical view] |
| Pfam | PF10453. NUFIP1. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 980610. |
Entry information
| Entry name | RSA1_YEAST | ||||||||
| Accession | Primary (citable) accession number: Q08932 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | FPAP (Fungal Proteome Annotation Project) | ||||||||

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