Q08884 (Q08884_VICNA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Narbonin EMBL CAA80979.1
Organism	Vicia narbonensis (Narbonne vetch) EMBL CAA80979.1
Taxonomic identifier	3912 [NCBI]
Taxonomic lineage	Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Fabales › Fabaceae › Papilionoideae › Fabeae › Vicia

Protein attributes

Sequence length	291 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453

Ontologies

Keywords
Technical term	3D-structure PDB 1NAR
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	2 – 291	290	seed storage 2S globulin EMBL CAA80979.1		PRO_5000147436

Sequences

	Sequence		Length	Mass (Da)
	Q08884 [UniParc]. Last modified July 5, 2004. Version 2. Checksum: DC8847C4DEC7307F	FASTA	291	33,288
	10 20 30 40 50 60 MPKPIFREYI GVKPNSTTLH DFPTEIINTE TLEFHYILGF AIESYYESGK GTGTFEESWD 70 80 90 100 110 120 VELFGPEKVK NLKRRHPEVK VVISIGGRGV NTPFDPAEEN VWVSNAKESL KLIIQKYSDD 130 140 150 160 170 180 SGNLIDGIDI HYEHIRSDEP FATLMGQLIT ELKKDDDLNI NVVSIAPSEN NSSHYQKLYN 190 200 210 220 230 240 AKKDYINWVD YQFSNQQKPV STDDAFVEIF KSLEKDYHPH KVLPGFSTDP LDTKHNKITR 250 260 270 280 290 DIFIGGCTRL VQTFSLPGVF FWNANDSVIP KRDGDKPFIV ELTLQQLLAK R

References

[1]	"Narbonin, a novel 2S protein from Vicia narbonensis L. seeds: cDNA, gene structure and developmentally regulated formation." Nong V.H., Schlesier B., Bassuner R., Repik A., Horstmann C., Muntz K. Plant Mol. Biol. 28:61-72(1995) [PubMed: 7787188] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Cotyledon EMBL CAA80979.1.
[2]	"Crystal-structure of narbonin at 1.8 A resolution." Hennig M., Pfeffer-Hennig S., Dauter Z., Wilson K.S., Schlesier B., Nong V.H. Acta Crystallogr. 51:177-189(1995) Cited for: NUCLEOTIDE SEQUENCE. Tissue: Cotyledon EMBL CAA80979.1.
[3]	"Studies on seed globulins from legumes. VII. Narbonin, a 2S globulin from Vicia narbonensis L." Schlesier B., Manteuffel R., Rudolph A., Behlke J. Biochem. Physiol. Pflanz. 173:420-428(1978) Cited for: NUCLEOTIDE SEQUENCE. Tissue: Cotyledon EMBL CAA80979.1.
[4]	Nong V. Submitted (AUG-1993) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Cotyledon EMBL CAA80979.1.
[5]	"Crystal structure of narbonin at 1.8 A resolution." Hennig M., Pfeffer-Hennig S., Dauter Z., Wilson K.S., Schlesier B., Nong V.H. Acta Crystallogr. D Biol. Crystallogr. 51:177-189(1995) [PubMed: 15299319] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 2-289.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

Z25532 mRNA. Translation: CAA80979.1.

PIR

S56696.
S56698.
S71764.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1NAR	X-ray	1.80	A	2-289	[»]

ProteinModelPortal

Q08884.

SMR

Q08884. Positions 2-289.

ModBase

Search...

Protein family/group databases

CAZy

GH18. Glycoside Hydrolase Family 18.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR000677. 2S_globulin.
IPR001223. Glyco_hydro18cat.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]

Gene3D

G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.

Pfam

PF00704. Glyco_hydro_18. 1 hit.
[Graphical view]

PRINTS

PR00551. 2SGLOBULIN.

SUPFAM

SSF51445. Glyco_hydro_cat. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q08884_VICNA

Accession

Primary (citable) accession number: Q08884

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	July 5, 2004
Last modified:	May 31, 2011
This is version 58 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)