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Q08816 (YO352_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YOR352W
Gene names
Ordered Locus Names:YOR352W
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length343 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Subcellular location

Cytoplasm. Nucleus Ref.3.

Miscellaneous

Present with 3510 molecules/cell in log phase SD medium.

Ontologies

Keywords
   Cellular componentCytoplasm
Nucleus
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

holo TFIIH complex

Inferred from direct assay PubMed 22411836. Source: SGD

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 343343Uncharacterized protein YOR352W
PRO_0000245290

Amino acid modifications

Modified residue691Phosphotyrosine Ref.6
Modified residue1051Phosphoserine Ref.6
Modified residue1081Phosphoserine Ref.6
Modified residue3421Phosphoserine Ref.5

Sequences

Sequence LengthMass (Da)Tools
Q08816 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: E52A1C2DF5A5141A

FASTA34339,275
        10         20         30         40         50         60 
MSEPNTPLHA QPNEQLDLNN LNDLDEKDID DLNLDPNSDV EISADSGDVV NSNIDNVIWQ 

        70         80         90        100        110        120 
RNCNKKRRYH TPEFNDVYNE TNNTINDVTM LDDVDDFQPR INVSSPFSSA TKLSELLPND 

       130        140        150        160        170        180 
HNGTSHPRRL SMSQQSKFIS YVDDQLLQIQ RKFVQSRGLN IKNGYASLTP LLQDLKTLVD 

       190        200        210        220        230        240 
FVWYSIAHVP NSDYLLQSEE KRHCPDSRNP KDTCGYSSYF GQGSYLIKIA DDLIDYVEKF 

       250        260        270        280        290        300 
TFKNMEDSEI NDTLSKLFKL FFILDRIFVI LTDDNDNCKE VPKTSSASKN IAGLNGTDIV 

       310        320        330        340 
RLKGIAERTR VRLPIFLESQ GIHGYHYELS KIYEGFLDHA NSF 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XV."
Dujon B., Albermann K., Aldea M., Alexandraki D., Ansorge W., Arino J., Benes V., Bohn C., Bolotin-Fukuhara M., Bordonne R., Boyer J., Camasses A., Casamayor A., Casas C., Cheret G., Cziepluch C., Daignan-Fornier B., Dang V.-D. expand/collapse author list , de Haan M., Delius H., Durand P., Fairhead C., Feldmann H., Gaillon L., Galisson F., Gamo F.-J., Gancedo C., Goffeau A., Goulding S.E., Grivell L.A., Habbig B., Hand N.J., Hani J., Hattenhorst U., Hebling U., Hernando Y., Herrero E., Heumann K., Hiesel R., Hilger F., Hofmann B., Hollenberg C.P., Hughes B., Jauniaux J.-C., Kalogeropoulos A., Katsoulou C., Kordes E., Lafuente M.J., Landt O., Louis E.J., Maarse A.C., Madania A., Mannhaupt G., Marck C., Martin R.P., Mewes H.-W., Michaux G., Paces V., Parle-McDermott A.G., Pearson B.M., Perrin A., Pettersson B., Poch O., Pohl T.M., Poirey R., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rechmann S., Schwager C., Schweizer M., Sor F., Sterky F., Tarassov I.A., Teodoru C., Tettelin H., Thierry A., Tobiasch E., Tzermia M., Uhlen M., Unseld M., Valens M., Vandenbol M., Vetter I., Vlcek C., Voet M., Volckaert G., Voss H., Wambutt R., Wedler H., Wiemann S., Winsor B., Wolfe K.H., Zollner A., Zumstein E., Kleine K.
Nature 387:98-102(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Global analysis of protein localization in budding yeast."
Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K.
Nature 425:686-691(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
[4]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
[5]"A multidimensional chromatography technology for in-depth phosphoproteome analysis."
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-342, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[6]"Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution."
Holt L.J., Tuch B.B., Villen J., Johnson A.D., Gygi S.P., Morgan D.O.
Science 325:1682-1686(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-69; SER-105 AND SER-108, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z75260 Genomic DNA. Translation: CAA99681.1.
BK006948 Genomic DNA. Translation: DAA11113.1.
PIRS67264.
RefSeqNP_014997.1. NM_001183772.1.

3D structure databases

ProteinModelPortalQ08816.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid34737. 8 interactions.
DIPDIP-5639N.
IntActQ08816. 7 interactions.
MINTMINT-560176.
STRING4932.YOR352W.

Proteomic databases

PaxDbQ08816.
PeptideAtlasQ08816.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYOR352W; YOR352W; YOR352W.
GeneID854534.
KEGGsce:YOR352W.

Organism-specific databases

CYGDYOR352w.
SGDS000005879. YOR352W.

Phylogenomic databases

eggNOGNOG45793.
HOGENOMHOG000141966.
OMADFQPRIN.
OrthoDBEOG7TTQK5.

Enzyme and pathway databases

BioCycYEAST:G3O-33823-MONOMER.

Gene expression databases

GenevestigatorQ08816.

Family and domain databases

ProtoNetSearch...

Other

NextBio976925.

Entry information

Entry nameYO352_YEAST
AccessionPrimary (citable) accession number: Q08816
Secondary accession number(s): D6W347
Entry history
Integrated into UniProtKB/Swiss-Prot: July 11, 2006
Last sequence update: November 1, 1996
Last modified: March 19, 2014
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome XV

Yeast (Saccharomyces cerevisiae) chromosome XV: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD