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Protein

Aspartate ammonia-lyase

Gene

Sfri_0682

Organism
Shewanella frigidimarina (strain NCIMB 400)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-aspartate = fumarate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationImported

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-715-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Aspartate ammonia-lyaseUniRule annotation (EC:4.3.1.1UniRule annotation)
Short name:
AspartaseUniRule annotation
Gene namesi
Ordered Locus Names:Sfri_0682Imported
OrganismiShewanella frigidimarina (strain NCIMB 400)Imported
Taxonomic identifieri318167 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000000684 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi318167.Sfri_0682.

Structurei

3D structure databases

ProteinModelPortaliQ087M4.
SMRiQ087M4. Positions 4-461.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini16 – 347332Lyase_1InterPro annotationAdd
BLAST
Domaini413 – 46654FumaraseC_CInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class-II fumarase/aspartase family. Aspartase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiEICENYV.
OrthoDBiPOG091H01XG.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR004708. ApsA.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00839. aspA. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q087M4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNTNSTRIE EDLLGTKEVS NKFYYGIHTL RAMENFKLSN QKISDAPELV
60 70 80 90 100
RGMMLTKKAA AMANSELGAV SPEIANKIIE ACDLILTTGQ FVDQFPVDVY
110 120 130 140 150
QGGAGTSVNM NTNEVLANVA LELMGLEKGR YDVINPNDHV NKCQSTNDAY
160 170 180 190 200
PTGFRIALVN STDTLLEALT DLISAFDTKA TEFKTVLKMG RTQLQDAVPM
210 220 230 240 250
TLGQEFHAFA VTLREEIKSI KRCQELLLEV NLGATAIGTG LNTPIGYSSL
260 270 280 290 300
AIKHLAEITG REYVPAEDLI EATSDCGAYV MLHSAIKRMA IKMSKICNDL
310 320 330 340 350
RLLSSGPRTG FNDINLPQLQ AGSSIMPAKV NPVIPEVVNQ VAFKIVGNDI
360 370 380 390 400
TITMAAEAGQ LQLNVMEPVI GQAMFESLSL MGNACIALRE KCVEGITANP
410 420 430 440 450
DVCMNHVLNS IGIVTYLNPF IGHHEGDIIG KICAQTGKNV REVVLERGLL
460 470 480
TVEELDEILS VENLMHPKYQ AKRNTSKTKV
Length:480
Mass (Da):52,320
Last modified:October 31, 2006 - v1
Checksum:iB795AE3E30E2DDE6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA. Translation: ABI70541.1.
RefSeqiWP_011636166.1. NC_008345.1.

Genome annotation databases

EnsemblBacteriaiABI70541; ABI70541; Sfri_0682.
KEGGisfr:Sfri_0682.
PATRICi23495181. VBISheFri14343_0706.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA. Translation: ABI70541.1.
RefSeqiWP_011636166.1. NC_008345.1.

3D structure databases

ProteinModelPortaliQ087M4.
SMRiQ087M4. Positions 4-461.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi318167.Sfri_0682.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI70541; ABI70541; Sfri_0682.
KEGGisfr:Sfri_0682.
PATRICi23495181. VBISheFri14343_0706.

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiEICENYV.
OrthoDBiPOG091H01XG.

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-715-MONOMER.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR004708. ApsA.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00839. aspA. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ087M4_SHEFN
AccessioniPrimary (citable) accession number: Q087M4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: September 7, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.