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Q087I6 (LOLB_SHEFN) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Outer-membrane lipoprotein LolB
Gene names
Name:lolB
Ordered Locus Names:Sfri_0721
OrganismShewanella frigidimarina (strain NCIMB 400) [Complete proteome] [HAMAP]
Taxonomic identifier318167 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length203 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein By similarity. HAMAP-Rule MF_00233

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00233

Subcellular location

Cell outer membrane; Lipid-anchor By similarity HAMAP-Rule MF_00233.

Sequence similarities

Belongs to the LolB family.

Ontologies

Keywords
   Biological processProtein transport
Transport
   Cellular componentCell outer membrane
Membrane
   DomainSignal
   Molecular functionChaperone
   PTMLipoprotein
Palmitate
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentcell outer membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionprotein transporter activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential
Chain22 – 203182Outer-membrane lipoprotein LolB HAMAP-Rule MF_00233
PRO_0000336618

Amino acid modifications

Lipidation221N-palmitoyl cysteine Potential
Lipidation221S-diacylglycerol cysteine Potential

Sequences

Sequence LengthMass (Da)Tools
Q087I6 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 9CA85D962E3BB13C

FASTA20322,318
        10         20         30         40         50         60 
MRLSASLFHI ALVTVLLVLA GCSVTPSEDF SPINVTNAAQ AKAWELQGKI AVKTSEDKFS 

        70         80         90        100        110        120 
TNLYWLHQTK ANDLRLTTVL GTTVLTLKTN QGMATLDVDG KTYRDSNAQD LLTGISGWSI 

       130        140        150        160        170        180 
PLDSLPLWIT GQIGSNDKIV SYNPDGTIKQ LISHDPEANW VVSFLGWQQQ SGAQVPRLLK 

       190        200 
IEREDVQIKI QTNQWIAVAA KTK 

« Hide

References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000447 Genomic DNA. Translation: ABI70579.1.
RefSeqYP_749417.1. NC_008345.1.

3D structure databases

ProteinModelPortalQ087I6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING318167.Sfri_0721.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI70579; ABI70579; Sfri_0721.
GeneID4278363.
KEGGsfr:Sfri_0721.
PATRIC23495273. VBISheFri14343_0745.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG145604.
HOGENOMHOG000237293.
KOK02494.
OMAQSANLNW.
OrthoDBEOG6R5C6M.
ProtClustDBCLSK907366.

Enzyme and pathway databases

BioCycSFRI318167:GIXS-761-MONOMER.

Family and domain databases

HAMAPMF_00233. LolB.
InterProIPR004565. OM_lipoprot_LolB.
[Graphical view]
PfamPF03550. LolB. 1 hit.
[Graphical view]
TIGRFAMsTIGR00548. lolB. 1 hit.
PROSITEPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameLOLB_SHEFN
AccessionPrimary (citable) accession number: Q087I6
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: October 31, 2006
Last modified: February 19, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families