Q087H5 (Y732_SHEFN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0234 protein Sfri_0732

Gene names

Ordered Locus Names:

Sfri_0732

Organism

Shewanella frigidimarina (strain NCIMB 400) [Complete proteome] [HAMAP]

Taxonomic identifier

318167 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella frigidimarina

Protein attributes

Sequence length	161 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0234 family.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 161	161	UPF0234 protein Sfri_0732 HAMAP-Rule MF_00632		PRO_0000261973

Sequences

	Sequence		Length	Mass (Da)
	Q087H5 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: B63C77A204A5E59E	FASTA	161	18,251
	10 20 30 40 50 60 MPSMDIVSEV DEEELRNAVE NSRREVAGRF DLRGKEIEID LKDNVVTLKS EDDFICKQLV 70 80 90 100 110 120 DILRIQLSKR NVDPSSMEVD EKAVHSGKTF SLKVNFKQGI DSLVAKKLVK AIKDSKLKVQ 130 140 150 160 AAIQGDSVRI TGKKRDDLQA VMRLAKESEL GQPFQFDNFR D

References

[1]

"Complete sequence of Shewanella frigidimarina NCIMB 400." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H., Newman D., Tiedje J.M. , Zhou J., Romine M.F., Culley D.E., Serres M., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCIMB 400.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000447 Genomic DNA. Translation: ABI70590.1.
RefSeq	YP_749428.1. NC_008345.1.
3D structure databases
ProteinModelPortal	Q087H5.
SMR	Q087H5. Positions 2-161.
ModBase	Search...
Protein-protein interaction databases
STRING	318167.Sfri_0732.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABI70590; ABI70590; Sfri_0732.
GeneID	4277639.
KEGG	sfr:Sfri_0732.
PATRIC	23495297. VBISheFri14343_0757.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1666.
HOGENOM	HOG000249184.
KO	K09767.
OMA	SDFDRQE.
ProtClustDB	PRK05412.
Enzyme and pathway databases
BioCyc	SFRI318167:GIXS-772-MONOMER.
Family and domain databases
HAMAP	MF_00632. UPF0234.
InterPro	IPR007551. DUF520. [Graphical view]
Pfam	PF04461. DUF520. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y732_SHEFN

Accession

Primary (citable) accession number: Q087H5

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 28, 2006
Last sequence update:	October 31, 2006
Last modified:	May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program