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Q08793

- YCXB_BACSU

UniProt

Q08793 - YCXB_BACSU

Protein

Uncharacterized protein YcxB

Gene

ycxB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 83 (01 Oct 2014)
      Sequence version 1 (01 Feb 1995)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciBSUB:BSU03540-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein YcxB
    Alternative name(s):
    ORF6
    Gene namesi
    Name:ycxB
    Ordered Locus Names:BSU03540
    OrganismiBacillus subtilis (strain 168)
    Taxonomic identifieri224308 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001570: Chromosome

    Organism-specific databases

    GenoListiBSU03540.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 185185Uncharacterized protein YcxBPRO_0000049485Add
    BLAST

    Proteomic databases

    PaxDbiQ08793.

    Interactioni

    Protein-protein interaction databases

    STRINGi224308.BSU03540.

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei31 – 5121HelicalSequence AnalysisAdd
    BLAST
    Transmembranei68 – 8821HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG123206.
    HOGENOMiHOG000155509.
    OMAiGIRICSK.
    OrthoDBiEOG6ZH2J8.

    Family and domain databases

    InterProiIPR025588. YcxB.
    [Graphical view]
    PfamiPF14317. YcxB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q08793-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIQYASESIN LPGEITFKDV REIFFYQIAK ISCFYFLLFC AIFAAVNFIN    50
    GWPRIVYGSD ALNLFMNSML IIVMSVLFTL LLLLLLYVKF SRAYKKNERM 100
    KSKRTYTLNQ EGIRICSKKY DLIFNWDEIT AVFEYKNIFR VNTSSGQYIA 150
    IPKHFFHSEE EMNRFKEIIL KNTETKKLKF KKDQH 185
    Length:185
    Mass (Da):22,034
    Last modified:February 1, 1995 - v1
    Checksum:i88C0B7DCE5DD2299
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X70356 Genomic DNA. Translation: CAA49822.1.
    D50453 Genomic DNA. Translation: BAA08988.1.
    AL009126 Genomic DNA. Translation: CAB12148.1.
    PIRiI40490.
    RefSeqiNP_388236.1. NC_000964.3.
    WP_003246703.1. NZ_CM000487.1.

    Genome annotation databases

    EnsemblBacteriaiCAB12148; CAB12148; BSU03540.
    GeneIDi938305.
    KEGGibsu:BSU03540.
    PATRICi18972271. VBIBacSub10457_0364.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X70356 Genomic DNA. Translation: CAA49822.1 .
    D50453 Genomic DNA. Translation: BAA08988.1 .
    AL009126 Genomic DNA. Translation: CAB12148.1 .
    PIRi I40490.
    RefSeqi NP_388236.1. NC_000964.3.
    WP_003246703.1. NZ_CM000487.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224308.BSU03540.

    Proteomic databases

    PaxDbi Q08793.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB12148 ; CAB12148 ; BSU03540 .
    GeneIDi 938305.
    KEGGi bsu:BSU03540.
    PATRICi 18972271. VBIBacSub10457_0364.

    Organism-specific databases

    GenoListi BSU03540.

    Phylogenomic databases

    eggNOGi NOG123206.
    HOGENOMi HOG000155509.
    OMAi GIRICSK.
    OrthoDBi EOG6ZH2J8.

    Enzyme and pathway databases

    BioCyci BSUB:BSU03540-MONOMER.

    Family and domain databases

    InterProi IPR025588. YcxB.
    [Graphical view ]
    Pfami PF14317. YcxB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of the genetic locus responsible for surfactin synthesis in Bacillus subtilis."
      Cosmina P., Rodriguez F., de Ferra F., Grandi G., Perego M., Venema G., van Sinderen D.
      Mol. Microbiol. 8:821-831(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: 168 / JH642.
    2. "The 25 degrees-36 degrees region of the Bacillus subtilis chromosome: determination of the sequence of a 146 kb segment and identification of 113 genes."
      Yamane K., Kumano M., Kurita K.
      Microbiology 142:3047-3056(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: 168.
    3. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
      Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
      , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
      Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 168.

    Entry informationi

    Entry nameiYCXB_BACSU
    AccessioniPrimary (citable) accession number: Q08793
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: February 1, 1995
    Last modified: October 1, 2014
    This is version 83 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Bacillus subtilis
      Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

    External Data

    Dasty 3