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Q08793

- YCXB_BACSU

UniProt

Q08793 - YCXB_BACSU

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Protein

Uncharacterized protein YcxB

Gene

ycxB

Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU03540-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YcxB
Alternative name(s):
ORF6
Gene namesi
Name:ycxB
Ordered Locus Names:BSU03540
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU03540.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei31 – 5121HelicalSequence AnalysisAdd
BLAST
Transmembranei68 – 8821HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 185185Uncharacterized protein YcxBPRO_0000049485Add
BLAST

Proteomic databases

PaxDbiQ08793.

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU03540.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG123206.
HOGENOMiHOG000155509.
OMAiGIRICSK.
OrthoDBiEOG6ZH2J8.

Family and domain databases

InterProiIPR025588. YcxB.
[Graphical view]
PfamiPF14317. YcxB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q08793-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MIQYASESIN LPGEITFKDV REIFFYQIAK ISCFYFLLFC AIFAAVNFIN
60 70 80 90 100
GWPRIVYGSD ALNLFMNSML IIVMSVLFTL LLLLLLYVKF SRAYKKNERM
110 120 130 140 150
KSKRTYTLNQ EGIRICSKKY DLIFNWDEIT AVFEYKNIFR VNTSSGQYIA
160 170 180
IPKHFFHSEE EMNRFKEIIL KNTETKKLKF KKDQH
Length:185
Mass (Da):22,034
Last modified:February 1, 1995 - v1
Checksum:i88C0B7DCE5DD2299
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X70356 Genomic DNA. Translation: CAA49822.1.
D50453 Genomic DNA. Translation: BAA08988.1.
AL009126 Genomic DNA. Translation: CAB12148.1.
PIRiI40490.
RefSeqiNP_388236.1. NC_000964.3.
WP_003246703.1. NZ_CM000487.1.

Genome annotation databases

EnsemblBacteriaiCAB12148; CAB12148; BSU03540.
GeneIDi938305.
KEGGibsu:BSU03540.
PATRICi18972271. VBIBacSub10457_0364.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X70356 Genomic DNA. Translation: CAA49822.1 .
D50453 Genomic DNA. Translation: BAA08988.1 .
AL009126 Genomic DNA. Translation: CAB12148.1 .
PIRi I40490.
RefSeqi NP_388236.1. NC_000964.3.
WP_003246703.1. NZ_CM000487.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224308.BSU03540.

Proteomic databases

PaxDbi Q08793.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB12148 ; CAB12148 ; BSU03540 .
GeneIDi 938305.
KEGGi bsu:BSU03540.
PATRICi 18972271. VBIBacSub10457_0364.

Organism-specific databases

GenoListi BSU03540.

Phylogenomic databases

eggNOGi NOG123206.
HOGENOMi HOG000155509.
OMAi GIRICSK.
OrthoDBi EOG6ZH2J8.

Enzyme and pathway databases

BioCyci BSUB:BSU03540-MONOMER.

Family and domain databases

InterProi IPR025588. YcxB.
[Graphical view ]
Pfami PF14317. YcxB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of the genetic locus responsible for surfactin synthesis in Bacillus subtilis."
    Cosmina P., Rodriguez F., de Ferra F., Grandi G., Perego M., Venema G., van Sinderen D.
    Mol. Microbiol. 8:821-831(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168 / JH642.
  2. "The 25 degrees-36 degrees region of the Bacillus subtilis chromosome: determination of the sequence of a 146 kb segment and identification of 113 genes."
    Yamane K., Kumano M., Kurita K.
    Microbiology 142:3047-3056(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  3. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.

Entry informationi

Entry nameiYCXB_BACSU
AccessioniPrimary (citable) accession number: Q08793
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: October 29, 2014
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

External Data

Dasty 3