Reviewed,
UniProtKB/Swiss-Prot Q08729 (DSE3_YEAST)
Last modified
January 19, 2010.
Version 56.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Protein DSE3 Alternative name(s): Daughter specific expression protein 3 | ||||
| Gene names |
| ||||
| Organism | Saccharomyces cerevisiae (Baker's yeast) [Complete proteome] | ||||
| Taxonomic identifier | 4932 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 430 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | May be involved in the establishment of the daughter fate. |
| Subcellular location | |
| Developmental stage | Expressed in daughter cells. Ref.4 |
| Induction | Expressed periodically during cell division. Requires ACE2, CBK1, MOB2 and SWI5. Ref.4 Ref.5 |
| Miscellaneous | Present with 922 molecules/cell in log phase SD medium. Ref.7 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cell cycle |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | cell cycle Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | cellular bud neck Ref.6 Inferred from direct assay. Source: SGD |
| Molecular function | protein binding Inferred from physical interaction. Source: IntAct |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| CSM1 | P25651 | 3 | EBI-32325,EBI-22001 | |
| SAM50 | P53969 | 1 | EBI-32325,EBI-28646 |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 430 | 430 | Protein DSE3 | PRO_0000233007 | |||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Sequencing analysis of a 36.8 kb fragment of yeast chromosome XV reveals 26 open reading frames including SEC63, CDC31, SUG2, GCD1, RBL2, PNT1, PAC1 and VPH1." Poirey R., Jauniaux J.-C. Yeast 13:483-487(1997) [PubMed: 9153759] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome XV." Dujon B., Albermann K., Aldea M., Alexandraki D., Ansorge W., Arino J., Benes V., Bohn C., Bolotin-Fukuhara M., Bordonne R., Boyer J., Camasses A., Casamayor A., Casas C., Cheret G., Cziepluch C., Daignan-Fornier B., Dang V.-D. Kleine K.Nature 387:98-102(1997) [PubMed: 9169874] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 96604 / S288c / FY1679. |
| [3] | "Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae." Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. LaBaer J.Genome Res. 17:536-543(2007) [PubMed: 17322287] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 204508 / S288c. |
| [4] | "Yeast Cbk1 and Mob2 activate daughter-specific genetic programs to induce asymmetric cell fates." Colman-Lerner A., Chin T.E., Brent R. Cell 107:739-750(2001) [PubMed: 11747810] [Abstract] Cited for: INDUCTION, DEVELOPMENTAL STAGE. |
| [5] | "Overlapping and distinct roles of the duplicated yeast transcription factors Ace2p and Swi5p." Doolin M.-T., Johnson A.L., Johnston L.H., Butler G. Mol. Microbiol. 40:422-432(2001) [PubMed: 11309124] [Abstract] Cited for: INDUCTION. |
| [6] | "Global analysis of protein localization in budding yeast." Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K. Nature 425:686-691(2003) [PubMed: 14562095] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. |
| [7] | "Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. |
| [8] | "New weakly expressed cell cycle-regulated genes in yeast." de Lichtenberg U., Wernersson R., Jensen T.S., Nielsen H.B., Fausboell A., Schmidt P., Hansen F.B., Knudsen S., Brunak S. Yeast 22:1191-1201(2005) [PubMed: 16278933] [Abstract] Cited for: PERIODIC EXPRESSION DURING CELL CYCLE. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | Z75171 Genomic DNA. Translation: CAA99486.1. AY693175 Genomic DNA. Translation: AAT93194.1. |
| PIR | S67161. |
| RefSeq | NP_014907.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-1997N. |
| IntAct | Q08729. 28 interactions. |
| STRING | Q08729. |
Genome annotation databases | |
| Ensembl | YOR264W; YOR264W; YOR264W; Saccharomyces cerevisiae. [Genome view] |
| GeneID | 854437. |
| KEGG | sce:YOR264W. |
| NMPDR | fig|4932.3.peg.6019. |
Organism-specific databases | |
| CYGD | YOR264w. |
| SGD | S000005790. DSE3. |
Phylogenomic databases | |
| eggNOG | fuNOG12785. |
| HOGENOM | HBG202895. |
| OMA | VPELFLH. |
| OrthoDB | EOG9QFXXC. |
| PhylomeDB | Q08729. |
Gene expression databases | |
| ArrayExpress | Q08729. |
| Genevestigator | Q08729. |
| GermOnline | YOR264W. Saccharomyces cerevisiae. |
Family and domain databases | |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 976676. |
Entry information
| Entry name | DSE3_YEAST | ||||||||
| Accession | Primary (citable) accession number: Q08729 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | FPAP (Fungal Proteome Annotation Project) | ||||||||

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