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Q086F7

- DEOD_SHEFN

UniProt

Q086F7 - DEOD_SHEFN

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Protein
Purine nucleoside phosphorylase DeoD-type
Gene
deoD, Sfri_1005
Organism
Shewanella frigidimarina (strain NCIMB 400)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-1048-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-type (EC:2.4.2.1)
Short name:
PNP
Gene namesi
Name:deoD
Ordered Locus Names:Sfri_1005
OrganismiShewanella frigidimarina (strain NCIMB 400)
Taxonomic identifieri318167 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000000684: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 236236Purine nucleoside phosphorylase DeoD-typeUniRule annotation
PRO_1000069644Add
BLAST

Interactioni

Subunit structurei

Homohexamer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi318167.Sfri_1005.

Structurei

3D structure databases

ProteinModelPortaliQ086F7.
SMRiQ086F7. Positions 2-234.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0813.
HOGENOMiHOG000274896.
KOiK03784.
OMAiECYNEVR.
OrthoDBiEOG6BKJC5.

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.
PROSITEiPS01232. PNP_UDP_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q086F7-1 [UniParc]FASTAAdd to Basket

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MATPHINAVE GAFAETVLFP GDPLRAKYIA ETFLENVEQV TDVRNMLGFT    50
GTYKGKRISV MGSGMGIPSC SIYAHELIKD YGVKNLIRVG TCGAISTDVK 100
VRDVIIGMGA CTDSRVNRLR FKDNDFAAIA DYSLLSAVVD SAKAHGTKIR 150
VGNVFSADLF YTPDPQMFDV MEKMGILGVE MEAAGLYGVA HELGAKALCV 200
VTVSDHIRTG EKTTSDERQT TFSDMIIMTL DAALTL 236
Length:236
Mass (Da):25,502
Last modified:October 31, 2006 - v1
Checksum:i029336DE02291E02
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000447 Genomic DNA. Translation: ABI70858.1.
RefSeqiYP_749696.1. NC_008345.1.

Genome annotation databases

EnsemblBacteriaiABI70858; ABI70858; Sfri_1005.
GeneIDi4278379.
KEGGisfr:Sfri_1005.
PATRICi23495865. VBISheFri14343_1039.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000447 Genomic DNA. Translation: ABI70858.1 .
RefSeqi YP_749696.1. NC_008345.1.

3D structure databases

ProteinModelPortali Q086F7.
SMRi Q086F7. Positions 2-234.
ModBasei Search...

Protein-protein interaction databases

STRINGi 318167.Sfri_1005.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABI70858 ; ABI70858 ; Sfri_1005 .
GeneIDi 4278379.
KEGGi sfr:Sfri_1005.
PATRICi 23495865. VBISheFri14343_1039.

Phylogenomic databases

eggNOGi COG0813.
HOGENOMi HOG000274896.
KOi K03784.
OMAi ECYNEVR.
OrthoDBi EOG6BKJC5.

Enzyme and pathway databases

BioCyci SFRI318167:GIXS-1048-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
PROSITEi PS01232. PNP_UDP_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NCIMB 400.

Entry informationi

Entry nameiDEOD_SHEFN
AccessioniPrimary (citable) accession number: Q086F7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: October 31, 2006
Last modified: May 14, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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