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Reviewed, UniProtKB/Swiss-Prot Q08623 (HDD1A_HUMAN)

Last modified November 25, 2008. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Haloacid dehalogenase-like hydrolase domain-containing protein 1A
      Short name=GS1 protein
Gene names
Name: HDHD1A
Synonyms: DXF68S1E, FAM16AX, GS1
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length214 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the HAD-like hydrolase superfamily. CbbY/cbbZ/gph/yieH family.

Ontologies

Gene Ontology (GO)

   Biological processmetabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 214214Haloacid dehalogenase-like hydrolase domain-containing protein 1A
PRO_0000108068

Experimental info

Sequence conflict741T → M in AAA58622. Ref.1
Sequence conflict1021G → R in AAH12494. Ref.3
Sequence conflict1391D → G in BAD97125. Ref.2
Sequence conflict1771V → A in AAA58622. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Q08623-1 [UniParc].

Last modified August 30, 2005. Version 2.
Checksum: 93F74475D96423F1

FASTA21423,730
        10         20         30         40         50         60 
MDGLLLDTER LYSVVFQEIC NRYDKKYSWD VKSLVMGKKA LEAAQIIIDV LQLPMSKEEL 

        70         80         90        100        110        120 
VEESQTKLKE VFPTAALMPG AEKLIIHLRK HGIPFALATS SGSASFDMKT SRHKEFFSLF 

       130        140        150        160        170        180 
SHIVLGDDPE VQHGKPDPDI FLACAKRFSP PPAMEKCLVF EDAPNGVEAA LAAGMQVVMV 

       190        200        210 
PDGNLSRDLT TKATLVLNSL QDFQPELFGL PSYE 

« Hide

References

« Hide 'large scale' references
[1]"Isolation of a new gene from the distal short arm of the human X chromosome that escapes X-inactivation."
Yen P.H., Ellison J., Salido E.C., Mohandas T., Shapiro L.
Hum. Mol. Genet. 1:47-52(1992) [PubMed: 1284467] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S.
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Liver cancer.
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Testis.

Cross-references

Sequence databases

M86934 mRNA. Translation: AAA58622.1.
AK223405 mRNA. Translation: BAD97125.1.
BC012494 mRNA. Translation: AAH12494.1.
RefSeqNP_036212.3.
UniGeneHs.185910

3D structure databases

ModBaseSearch...

PTM databases

PhosphoSiteQ08623.

Genome annotation databases

EnsemblENSG00000130021. Homo sapiens. [Contig view]
GeneID8226.
KEGGhsa:8226.
NMPDRfig|9606.3.peg.32410.

Organism-specific databases

HGNCHGNC:16818. HDHD1A.
MIM306480. gene.
PharmGKBPA128394539.
GenAtlasSearch...
GeneCardsSearch...

Phylogenomic databases

HOGENOMQ08623.
HOVERGENQ08623.

Gene expression databases

ArrayExpressQ08623.
CleanExHS_HDHD1A.
GermOnlineENSG00000130021. Homo sapiens.

Family and domain databases

InterProIPR005834. Dehalogen-like_hydro.
IPR006402. HAD-SF_hydro_IA_v3.
[Graphical view]
PfamPF00702. Hydrolase. 1 hit.
[Graphical view]
TIGRFAMsTIGR01509. HAD-SF-IA-v3. 1 hit.
ProtoNetSearch...

Other Resources

LinkHubQ08623.
NextBio30966.
SOURCESearch...

Entry information

Entry nameHDD1A_HUMAN
AccessionPrimary (citable) accession number: Q08623
Secondary accession number(s): Q53F84, Q96EB8
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: August 30, 2005
Last modified: November 25, 2008
This is version 59 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

Human chromosome X

Human chromosome X: entries, gene names and cross-references to MIM

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents