Q084T9 (Q084T9_SHEFN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
UDP-glucose 6-dehydrogenase EMBL ABI71226.1
EC=1.1.1.22 EMBL ABI71226.1

Gene names

Ordered Locus Names:

Sfri_1373

Organism

Shewanella frigidimarina (strain NCIMB 400) [Complete proteome] [HAMAP] EMBL ABI71226.1

Taxonomic identifier

318167 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	388 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABI71226.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	NAD binding Inferred from electronic annotation. Source: InterPro UDP-glucose 6-dehydrogenase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q084T9 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 186E60450E0120E2	FASTA	388	43,263
	10 20 30 40 50 60 MKIAIAGTGY VGLSNAMLLA QHNEVVAVDI IEEKINQLNA KISPIADVEI EDFLANKPLN 70 80 90 100 110 120 FTATLDKHAA YKDADFVIIA TPTDYDPATN YFNTSSVESV IKDVISINPN AVMIIKSTVP 130 140 150 160 170 180 VGYTERIKQE FSSDNILFSP EFLREGKALH DNLYPSRIIV GEQSDRAHTF ANLLLQGAIK 190 200 210 220 230 240 QDIEVLFTHS TEAEAVKLFS NTYLALRVAY FNELDTYAEA HGLDSKQIID GVCLDPRIGN 250 260 270 280 290 300 HYNNPSFGYG GYCLPKDTKQ LRANYADVPN NLISAIVDSN TTRKDFIADS ILKRNPKKVG 310 320 330 340 350 360 IYRLIMKSGS DNFRSSSIQG IMKRIKAKGV EVIIYEPVLE QDEFFHSKVY NDLAVFKLDA 370 380 DVIVSNRMAD ELADVGHKVY TRDLFCTD

References

[1]

"Complete sequence of Shewanella frigidimarina NCIMB 400." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H., Newman D., Tiedje J.M. , Zhou J., Romine M.F., Culley D.E., Serres M., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCIMB 400.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000447 Genomic DNA. Translation: ABI71226.1.
RefSeq	YP_750064.1. NC_008345.1.
3D structure databases
ProteinModelPortal	Q084T9.
SMR	Q084T9. Positions 1-387.
ModBase	Search...
Protein-protein interaction databases
STRING	Q084T9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4276980.
GenomeReviews	Gene locus Sfri_1373 in contig CP000447_GR.
KEGG	sfr:Sfri_1373.
NMPDR	fig|318167.10.peg.1323.
PATRIC	23496651. VBISheFri14343_1425.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1004.
HOGENOM	HBG400967.
OMA	LNFRATT.
PhylomeDB	Q084T9.
ProtClustDB	CLSK958259.
Family and domain databases
InterPro	IPR008927. 6-PGluconate_DH_C-like. IPR013328. DH_multihelical. IPR016040. NAD(P)-bd_dom. IPR017476. Nucleotide_sugar_DH. IPR014027. UDP-Glc/GDP-Man_DH_C. IPR014026. UDP-Glc/GDP-Man_DH_dimer. IPR001732. UDP-Glc/GDP-Man_DH_N. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. G3DSA:1.10.1040.10. Opine_DH. 1 hit. G3DSA:3.40.50.1870. UDP-Glc/GDP-Man_DH_C. 1 hit.
KO	K00012.
Pfam	PF00984. UDPG_MGDP_dh. 1 hit. PF03720. UDPG_MGDP_dh_C. 1 hit. PF03721. UDPG_MGDP_dh_N. 1 hit. [Graphical view]
PIRSF	PIRSF000124. UDPglc_GDPman_dh. 1 hit.
SMART	SM00984. UDPG_MGDP_dh_C. 1 hit. [Graphical view]
SUPFAM	SSF48179. 6DGDH_C_like. 1 hit. SSF52413. UDP-Glc/GDP-Man_DH_C. 1 hit.
TIGRFAMs	TIGR03026. NDP-sugDHase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q084T9_SHEFN

Accession

Primary (citable) accession number: Q084T9

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)