Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Copia protein

Gene

GIP

Organism
Drosophila simulans (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Copia proteinImported
Gene namesi
Name:GIPImported
OrganismiDrosophila simulans (Fruit fly)Imported
Taxonomic identifieri7240 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Organism-specific databases

FlyBaseiFBgn0044190. Dsim\copia\GIP.

Structurei

3D structure databases

ProteinModelPortaliQ08461.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini231 – 24515CCHC-typeInterPro annotationAdd
BLAST
Domaini476 – 644169Integrase catalyticInterPro annotationAdd
BLAST

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
4.10.60.10. 1 hit.
InterProiIPR025724. GAG-pre-integrase_dom.
IPR001584. Integrase_cat-core.
IPR012337. RNaseH-like_dom.
IPR013103. RVT_2.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF13976. gag_pre-integrs. 1 hit.
PF00665. rve. 1 hit.
PF07727. RVT_2. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS50994. INTEGRASE. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q08461-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKAKRNIKP FDGEKYAIWK FRIRALLAEQ DVLKVVDGLM PNEVDDSWKK
60 70 80 90 100
AERCAKSTII EYLSDSFLNF ATSDITARQI LENLDAVYER KSLASQLALR
110 120 130 140 150
KRLLSLKLSS EMSLLSHFHI FDELISELLA AGAKIEEMDK ISHLLITLPS
160 170 180 190 200
CYDGIITAIE TLSEENLTLA FVKNRLLDQE IKIKNDHNDT SKKVMNAIVH
210 220 230 240 250
NKNNTYKNNL FKNRVTKPKK IFKGNSKYKV KCHHCGREGH IKKDCFHYKR
260 270 280 290 300
ILNNKNKENE KQVQTATSHG IAFMVKEVNN TSVMDNCGFV LDSGASDHLI
310 320 330 340 350
NDESLYTDSV ELVPPLKIAV AKQGEFIYAT KRGIVRLRND HEITLEDVLF
360 370 380 390 400
CKEAAGNLMS VKRLQEAGMS IEFDKSGVTI SKNGLMVVKN SGMLNNVPVI
410 420 430 440 450
NFQAYSINAK HKNNFRLWHE RFGHISDGKL LEIKRKNMFS DQSLLNNLEL
460 470 480 490 500
SCEICEPCLN GKQARLPFKQ LKDKTHIKRP LFVVHSDVCG PITPVTLDDK
510 520 530 540 550
NYFVIFVDQF THYCVTYLIK YKSDVFSMFQ DFVAKSEAHF NLKVVYLYID
560 570 580 590 600
NGREYLSNEM RQFCVKKGIS YHLTVPHTPQ LNGVSERMIR TITEKARTMV
610 620 630 640 650
SGAKLDKSFW GEAVLTATYL INRIPSRALV DSSKTPYEMW HNKKPYLKHL
660 670 680 690 700
RVFGATVYVH IKNKQGKFDD KSFKSIFVGY EPNGFKLWDA VNEKFIVARD
710 720 730 740 750
VVVDETNMVN SRAVKFETVF LKDSKESENK NFPNDSRKII QTEFPNESKE
760 770 780 790 800
CDNIQFLKDS KESENKNFPN DSRKIIQTEF PNESKECDNI QFLKDSKESN
810 820 830 840 850
KYFLNESKKR KRDDHLNESK GSGNPNESRE SETAEHLKEI GIDNPTKNDG
860 870 880 890 900
IEIINRRSER LKTKPQISYN EEDNSLNKVV LNAHTIFNDV PNSFDEIQYR
910 920 930 940 950
DDKSSWEEAI NTELNAHKIN NTWTITKRPE NKNIVDSRWV FSVKYNELGN
960 970 980 990 1000
PIRYKARLVA RGFTQKYQID YEETFAPVAR ISSFRFILSL AIQYNLKVHQ
1010 1020 1030 1040 1050
MDVKTAFLNG SLKEEIYMRL PQGISCNSDN VCKLNKAIYG LKQAARCWFE
1060 1070 1080 1090 1100
VFEQALKECE FVNSSVDRCI YILDKDNINE NIYVLLYVDD VVIATGDMTR
1110 1120 1130 1140 1150
MNNFKRYLME KFRMTDLNEI KHFIGIRIEM HEDKIYLSQS AYVKKILSKF
1160 1170 1180 1190 1200
NMENCNAVST PLPSKINYEL LNSDEDCNTP CRSLIGCLMY IMLCTRPDLT
1210 1220 1230 1240 1250
TAVNILSRYS SKNNSELWQN LKRVLRYLKG TIDMKLIFKR NLAFENKIIG
1260 1270 1280 1290 1300
YVDSDWAGSE IDRKSTTGYL FKMFDFNLIC WNTKRQNSVA ASSTEAEYMA
1310 1320 1330 1340 1350
LFEAVREALW LKFLLTSINI KLENPIKIYE DNQGCISIAN NPSCHKRAKH
1360 1370 1380 1390 1400
IDIKYHFARE QVQNNVICLE YIPTENQLAD IFTKPLPAAR FVELRDKLGL

LQDDQSNAE
Length:1,409
Mass (Da):162,900
Last modified:November 1, 1996 - v1
Checksum:i403A9FFF66A21903
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D10880 Genomic DNA. Translation: BAA01703.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D10880 Genomic DNA. Translation: BAA01703.1.

3D structure databases

ProteinModelPortaliQ08461.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

FlyBaseiFBgn0044190. Dsim\copia\GIP.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
4.10.60.10. 1 hit.
InterProiIPR025724. GAG-pre-integrase_dom.
IPR001584. Integrase_cat-core.
IPR012337. RNaseH-like_dom.
IPR013103. RVT_2.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF13976. gag_pre-integrs. 1 hit.
PF00665. rve. 1 hit.
PF07727. RVT_2. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS50994. INTEGRASE. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ08461_DROSI
AccessioniPrimary (citable) accession number: Q08461
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.