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Protein

Putative agmatine deiminase

Gene

aguA

Organism
Shewanella frigidimarina (strain NCIMB 400)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Agmatine + H2O = N-carbamoylputrescine + NH3.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei361 – 3611Amidino-cysteine intermediateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-1680-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative agmatine deiminaseUniRule annotation (EC:3.5.3.12UniRule annotation)
Alternative name(s):
Agmatine iminohydrolaseUniRule annotation
Gene namesi
Name:aguAUniRule annotation
Ordered Locus Names:Sfri_1615
OrganismiShewanella frigidimarina (strain NCIMB 400)
Taxonomic identifieri318167 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000000684 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 370370Putative agmatine deiminasePRO_1000070569Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi318167.Sfri_1615.

Structurei

3D structure databases

ProteinModelPortaliQ083U9.
SMRiQ083U9. Positions 14-369.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the agmatine deiminase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DWY. Bacteria.
COG2957. LUCA.
HOGENOMiHOG000239346.
KOiK10536.
OMAiEVLLAWT.
OrthoDBiEOG6M3PB5.

Family and domain databases

HAMAPiMF_01841. Agmatine_deimin.
InterProiIPR017754. Agmatine_deiminase.
IPR007466. Peptidyl-Arg-deiminase_porph.
[Graphical view]
PfamiPF04371. PAD_porph. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03380. agmatine_aguA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q083U9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNMNVDATQ LTTKPSQDGF SMPAEWAQQQ AVWMIWPYRP DNWRSAGAYA
60 70 80 90 100
QATFAKVADA IGAVTPVYMG VPKAFLAQAK TVMPAHVTLV EIDSNDCWAR
110 120 130 140 150
DTGPTVVVNA KGECRGVDWG FNAWGGDNGG LYSPWDKDEL VAQKMLTQHG
160 170 180 190 200
FDRYQAPLIL EGGSIHVDGE GTCMTTAECL LNSNRNPDLT REQIEALLAE
210 220 230 240 250
YLNVKQFIWL PDGVYMDETD GHIDNLCCFA RPGEVVLHWT DDQSDPQYPR
260 270 280 290 300
SKAALDILQN TVDAQGRKLT VHLIPQPGPL YCTEEEAQGV AEGTGVPRTA
310 320 330 340 350
GERLAGSYAN FLITNNRIVF PLLDPVTDDI AAQKLQEIFP EYEIVGVPAR
360 370
EILLGGGNIH CITQQIPSGK
Length:370
Mass (Da):40,609
Last modified:October 31, 2006 - v1
Checksum:i8FF106870DC2DA92
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA. Translation: ABI71466.1.
RefSeqiWP_011637082.1. NC_008345.1.

Genome annotation databases

EnsemblBacteriaiABI71466; ABI71466; Sfri_1615.
KEGGisfr:Sfri_1615.
PATRICi23497175. VBISheFri14343_1675.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000447 Genomic DNA. Translation: ABI71466.1.
RefSeqiWP_011637082.1. NC_008345.1.

3D structure databases

ProteinModelPortaliQ083U9.
SMRiQ083U9. Positions 14-369.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi318167.Sfri_1615.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABI71466; ABI71466; Sfri_1615.
KEGGisfr:Sfri_1615.
PATRICi23497175. VBISheFri14343_1675.

Phylogenomic databases

eggNOGiENOG4105DWY. Bacteria.
COG2957. LUCA.
HOGENOMiHOG000239346.
KOiK10536.
OMAiEVLLAWT.
OrthoDBiEOG6M3PB5.

Enzyme and pathway databases

BioCyciSFRI318167:GIXS-1680-MONOMER.

Family and domain databases

HAMAPiMF_01841. Agmatine_deimin.
InterProiIPR017754. Agmatine_deiminase.
IPR007466. Peptidyl-Arg-deiminase_porph.
[Graphical view]
PfamiPF04371. PAD_porph. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03380. agmatine_aguA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NCIMB 400.

Entry informationi

Entry nameiAGUA_SHEFN
AccessioniPrimary (citable) accession number: Q083U9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: October 31, 2006
Last modified: November 11, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.